PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1AG060990.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | C3H | ||||||||
Protein Properties | Length: 95aa MW: 10704.3 Da PI: 7.8426 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 50.9 | 2.6e-16 | 20 | 45 | 1 | 26 |
--S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHg 26 +ktelC+ + +tG C+yGd+C+FaHg TRIDC1AG060990.2 20 FKTELCNKWEETGACPYGDQCQFAHG 45 79***********************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 95 aa Download sequence |
GQVATAADGL QFEVYSQGMF KTELCNKWEE TGACPYGDQC QFAHGIAELR PIIRHPRYKT 60 QVCRMVIGGA ICPYGHRCHF RHSITPADYI PLLHP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66810.1 | 1e-48 | C3H family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1AG060990.2 |