PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG058170.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 1823aa MW: 201176 Da PI: 5.2922

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG058170.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	57.9	1.7e-18	37	91	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +R t++qle+Le+ + ++yp++++r eL++klgLt+rq ++WF+ rR k+++ TRIDC1AG058170.4 37 RRVMKTPYQLEVLEQTYTDDPYPNEAKRVELSAKLGLTDRQLQMWFCHRRLKDRR 91 69999************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1823 aa Download sequence
DGGDEGAGAA PGSPASAPSA GAGPGGASGS SGKPTARRVM KTPYQLEVLE QTYTDDPYPN 60 EAKRVELSAK LGLTDRQLQM WFCHRRLKDR RPPPATKRRD EEVAVPVLAP PPVLHHSLPH 120 PHAEPTYGEQ LLLPCGSSRR GPGRSSAVPR ISAPEVDRRY YEAAHQVMLP PQAHVQLTRA 180 AHRAIETVQQ LIGEPLREDG PVLGDHFDPL PPGAFGAPMP VVTELHPCYR VDGLSRSCSK 240 AKLTNHASAF LPSIDPSVSS TVTGKRKYMS GNSSHLPSRA VHEYQFLPEH TSDIYERTSQ 300 SCFYDASAEA SNSRISSLST GSRLLHGAEK ASSYAFDGQV SGSSHLIQHG KPLISLSGSA 360 DYEMASNIDV SPAPIEGQFG IPQVAGLQNP LASAEGVDYH DEDAYRLDRK RKHNEESKIA 420 KEVDAEEKRI RKELEKQDVL KKKREEQMRK EVERYDRERK KEEERFMREK QREEERLQKE 480 QWREQKRMEK FLVKQSLRAE KLKQKEELRK EKEAARQKAA NERATARRIA REYMELMEDE 540 RLELMELVSR SKGLPSMLSL DSDTLQQLDS FRGMLTQFPT EAVRLKVPFS IKPWTSSESN 600 IGNLLMVWKF FFTFADVLEL PSFTLDEFVQ SLHDYDSRLL GELHVAVLKS IIKDIEDVAR 660 TSSVVSGVNQ SSSANPGGGH PQIVEGAYAW GFNILTWQRH LTYLTWPEIL RQFGLSAGFG 720 PQLKKRTEDV YHDDNEGRNS ADVISTLRNG SAAVKSAALM KERGYTNRRR SRHRLTPGTV 780 KFAAFHVLSL EGDEGLSILE VAEKIQRSGL RDLTTSKTPE ASISAALSRD TKLFERTAPL 840 TYCVKTPYRK DPADSEAVFS EAREKIRVFQ NAFSGCEEVE KDVEDAERGD DDSECDEADD 900 DPDGDEVNIE EKNVNASVAR AKDAGLPIAA GDTNDEVKGV INPSMPSSPH SKSPSGLQRM 960 VVKSTAVSTS SDPPIGASQD AEIDESNQGE SWVQGLAEGD YCDLSVEERL NALVALIGVA 1020 TEGNSMRAIL EERLEAANAL KKQMWAESQL DRRRSREEFA GRMQHDPCTD LKADADQGNN 1080 VGECTLTQVH NLIKENGGKA SSVNNDFLVD QQSQLNAGNM VHEGNGVSRI SNANPESLSA 1140 QQYASSEKTR SQLKSFIGHK AEQLYVYRSL PLGQDRRRNR YWQFSTSVSS NDPGSGRIFF 1200 ESRDGYWRLI DSAEAFDALV ASLDTRGIRE SHLHSMLQSI ESTFKDAIGR IKCATIEHSA 1260 GRNLRNGSSE IISPNHSNEF GSPCSTLSGV VSDTVVAYSD SFKIELGRND LEKVAISKRA 1320 CMFLKWMWEG NHQSTCAMKY GKKRCSDLIH GCDYCYQIYL AEETHCSSCH KTFKSIHSLS 1380 EHTSQCEEKR RTDPNWKIQI SDDSVPIRPR LLKLLLATIE ASVPAEALQP FWTDGYRKSW 1440 GVKLFSTSSN EEIFQLLTVL EGALKRDYLS SNFETTAELL NSNTLDFAGR NSIACSGSAA 1500 VLPWVPSTAA AVTLRLLDLD SSLSYTLDQK AGLNKEREAG DFIKGPSRYT AVKNKQEMGP 1560 VGAPGFDHHV GAQLTPSNGL RGRGRGGRGR GRGGRSLSRG GRVPRGVGSS PRIEFRGGRG 1620 RGSITESGSG SGSVRGRGRG RGRGLRTVRP RQPVELGARS IPKANLLGTF GMLSNAKPMT 1680 LHSPQSSGAE EWGLDRRAYA EDDEDNSVSQ SDESEGDEEN GEPMNEDYDE QLPDYSRDNS 1740 ASSPRQMMDS ESEDNDEYDE EGEEDGADYD AEQPMDEDND DAEMSGDDEL GDDGDDDDGG 1800 GSQGGAGNAD DDDATSYSSE YSE

Sequence ? help Back to Top

Protein Sequence Length: 1823 aa Download sequence

DGGDEGAGAA PGSPASAPSA GAGPGGASGS SGKPTARRVM KTPYQLEVLE QTYTDDPYPN  60
EAKRVELSAK LGLTDRQLQM WFCHRRLKDR RPPPATKRRD EEVAVPVLAP PPVLHHSLPH  120
PHAEPTYGEQ LLLPCGSSRR GPGRSSAVPR ISAPEVDRRY YEAAHQVMLP PQAHVQLTRA  180
AHRAIETVQQ LIGEPLREDG PVLGDHFDPL PPGAFGAPMP VVTELHPCYR VDGLSRSCSK  240
AKLTNHASAF LPSIDPSVSS TVTGKRKYMS GNSSHLPSRA VHEYQFLPEH TSDIYERTSQ  300
SCFYDASAEA SNSRISSLST GSRLLHGAEK ASSYAFDGQV SGSSHLIQHG KPLISLSGSA  360
DYEMASNIDV SPAPIEGQFG IPQVAGLQNP LASAEGVDYH DEDAYRLDRK RKHNEESKIA  420
KEVDAEEKRI RKELEKQDVL KKKREEQMRK EVERYDRERK KEEERFMREK QREEERLQKE  480
QWREQKRMEK FLVKQSLRAE KLKQKEELRK EKEAARQKAA NERATARRIA REYMELMEDE  540
RLELMELVSR SKGLPSMLSL DSDTLQQLDS FRGMLTQFPT EAVRLKVPFS IKPWTSSESN  600
IGNLLMVWKF FFTFADVLEL PSFTLDEFVQ SLHDYDSRLL GELHVAVLKS IIKDIEDVAR  660
TSSVVSGVNQ SSSANPGGGH PQIVEGAYAW GFNILTWQRH LTYLTWPEIL RQFGLSAGFG  720
PQLKKRTEDV YHDDNEGRNS ADVISTLRNG SAAVKSAALM KERGYTNRRR SRHRLTPGTV  780
KFAAFHVLSL EGDEGLSILE VAEKIQRSGL RDLTTSKTPE ASISAALSRD TKLFERTAPL  840
TYCVKTPYRK DPADSEAVFS EAREKIRVFQ NAFSGCEEVE KDVEDAERGD DDSECDEADD  900
DPDGDEVNIE EKNVNASVAR AKDAGLPIAA GDTNDEVKGV INPSMPSSPH SKSPSGLQRM  960
VVKSTAVSTS SDPPIGASQD AEIDESNQGE SWVQGLAEGD YCDLSVEERL NALVALIGVA  1020
TEGNSMRAIL EERLEAANAL KKQMWAESQL DRRRSREEFA GRMQHDPCTD LKADADQGNN  1080
VGECTLTQVH NLIKENGGKA SSVNNDFLVD QQSQLNAGNM VHEGNGVSRI SNANPESLSA  1140
QQYASSEKTR SQLKSFIGHK AEQLYVYRSL PLGQDRRRNR YWQFSTSVSS NDPGSGRIFF  1200
ESRDGYWRLI DSAEAFDALV ASLDTRGIRE SHLHSMLQSI ESTFKDAIGR IKCATIEHSA  1260
GRNLRNGSSE IISPNHSNEF GSPCSTLSGV VSDTVVAYSD SFKIELGRND LEKVAISKRA  1320
CMFLKWMWEG NHQSTCAMKY GKKRCSDLIH GCDYCYQIYL AEETHCSSCH KTFKSIHSLS  1380
EHTSQCEEKR RTDPNWKIQI SDDSVPIRPR LLKLLLATIE ASVPAEALQP FWTDGYRKSW  1440
GVKLFSTSSN EEIFQLLTVL EGALKRDYLS SNFETTAELL NSNTLDFAGR NSIACSGSAA  1500
VLPWVPSTAA AVTLRLLDLD SSLSYTLDQK AGLNKEREAG DFIKGPSRYT AVKNKQEMGP  1560
VGAPGFDHHV GAQLTPSNGL RGRGRGGRGR GRGGRSLSRG GRVPRGVGSS PRIEFRGGRG  1620
RGSITESGSG SGSVRGRGRG RGRGLRTVRP RQPVELGARS IPKANLLGTF GMLSNAKPMT  1680
LHSPQSSGAE EWGLDRRAYA EDDEDNSVSQ SDESEGDEEN GEPMNEDYDE QLPDYSRDNS  1740
ASSPRQMMDS ESEDNDEYDE EGEEDGADYD AEQPMDEDND DAEMSGDDEL GDDGDDDDGG  1800
GSQGGAGNAD DDDATSYSSE YSE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	1583	1593	RGRGGRGRGRG
2	1585	1595	RGRGGRGRGRG
3	1635	1645	RGRGGRGRGRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44180.1	0.0	HB-other family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG058170.4