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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | TRIDC1AG055260.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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| Family | HSF | ||||||||
| Protein Properties | Length: 300aa MW: 34222.1 Da PI: 5.0509 | ||||||||
| Description | HSF family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | HSF_DNA-bind | 88 | 1.2e-27 | 1 | 75 | 19 | 102 |
SEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXXXXXX CS
HSF_DNA-bind 19 iswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekikrkks 102
+sw + gn+fvv+d++ fa+ +Lp+ Fkhsnf+SFvRQLn+YgF+kv+ ++ weF+++ F +g+++ll++ikr+k
TRIDC1AG055260.1 1 VSWGRAGNTFVVWDPHVFAEALLPRLFKHSNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGQRHLLKTIKRRKP 75
79**********************************************999.........*********************985 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 300 aa Download sequence |
VSWGRAGNTF VVWDPHVFAE ALLPRLFKHS NFSSFVRQLN TYGFRKVDPD RWEFANEGFL 60 RGQRHLLKTI KRRKPPSNAP SSQQQALTSC LEVGEFGFEE EIDRLKRDKN LLITEVVKLR 120 QEQQATKDNV QAMEGRLRAA EQRQAQMMGF LARAMRNPHF FQQLVQKQDK RKELEDAISK 180 KRRRPIDNAP FYGSGATTSQ SEQLDSQFLF DSGVLSEPGM NGMENLAQNI QELGQGKTDE 240 EKKDEANGQL DINSDFWAEL FSDDFGDEDG SGLSELEGRR PEDIDELGQQ LGYLSSTSPQ |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 67 | 73 | LKTIKRR |
| 2 | 170 | 184 | KRKELEDAISKKRRR |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT3G22830.1 | 2e-88 | HSF family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | TRIDC1AG055260.1 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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