PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG054710.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 322aa    MW: 34507.1 Da    PI: 12.1283
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG054710.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B390.21.6e-28158258190
                       EEEE-..-HHHHTT-EE--HHH.HTT............---....--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-E CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh............ggkke..esktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDf 79 
                       f+k+ tpsdv+k++rlv+pk++ae+h                   +++ l + d  g+ W+++++y+++s++yvltkGW++Fvk++gL +gD 
  TRIDC1AG054710.3 158 FDKTVTPSDVGKLNRLVIPKQHAEKHfplqlpsastavP---GecKGVLLNFDDAVGKMWRFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDA 247
                       89***************************8887776652...144889********************************************* PP

                       EEEEE-SSSEE CS
                B3  80 vvFkldgrsef 90 
                       v F+++ + + 
  TRIDC1AG054710.3 248 VGFYRSASGNN 258
                       ****7655444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
RPRRRPSRCS ASAAGPARSW TRRSLAPRRT PAASAGCRRP STRAWCRSPT GAGARRSMNA  60
TSASGSAPSR GRPRLRAPTM RRRSASAAAM PSPTSARSPS PTPATPPSSA SSPPAPRPRS  120
WTCCASTSTP MSSRSISAPS SPPRPAAPSA AARREHLFDK TVTPSDVGKL NRLVIPKQHA  180
EKHFPLQLPS ASTAVPGECK GVLLNFDDAV GKMWRFRYSY WNSSQSYVLT KGWSRFVKEK  240
GLHAGDAVGF YRSASGNNQL FIDCKLRSKS TTTFLNAAAA PSPAPVTRTV RLFGVDLLTA  300
PAPEHEEYGL VPKTNKRSMD AS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68840.29e-56RAV family protein