PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG051700.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HSF

Protein Properties

Length: 375aa MW: 41710.4 Da PI: 4.6604

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG051700.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	107.1	1.3e-33	19	110	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 Fl k+ye++ed+++ +++sw g sfvv+++ +f++++LpkyFkh+nf+SF+RQLn+YgF+k++ e+ weF+++ F +g+ +ll TRIDC1AG051700.1 19 FLIKTYEMVEDPATGRVVSWGPGGASFVVWNPPDFSRDLLPKYFKHNNFSSFIRQLNTYGFRKIDPER---------WEFANDDFIRGHMHLL 102 9**************************************************************999.........************ PP XXXXXXXX CS HSF_DNA-bind 95 ekikrkks 102 ++i+r+k TRIDC1AG051700.1 103 KNIHRRKP 110 ***985 PP

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence
MEGGSQSQPQ GASLSPAPFL IKTYEMVEDP ATGRVVSWGP GGASFVVWNP PDFSRDLLPK 60 YFKHNNFSSF IRQLNTYGFR KIDPERWEFA NDDFIRGHMH LLKNIHRRKP VHSHSPQNQV 120 NGPLAESERR EYEEEISRLK HENSVLVAEL QRQAQQQCGL SWLMQSLEER LLAMEQRQAD 180 VVASVRDIQQ RRRGDVHPGQ QTMLELEPTD HFSKKRRVPT IGFFAEEPAA AAEEQLRATG 240 GETPGMVMVN AEPFEKMELA LVSMEKLVQR AGNYAPSEDM FSAATASASA SAAPSTDDPA 300 HAGLQEAPVE TGVDLQPTSP ELAEPPGYAV QSPMLLFPEI QEDKRNTTAE VDMSSEASTT 360 DTSQDETNAE AETPH

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence

MEGGSQSQPQ GASLSPAPFL IKTYEMVEDP ATGRVVSWGP GGASFVVWNP PDFSRDLLPK  60
YFKHNNFSSF IRQLNTYGFR KIDPERWEFA NDDFIRGHMH LLKNIHRRKP VHSHSPQNQV  120
NGPLAESERR EYEEEISRLK HENSVLVAEL QRQAQQQCGL SWLMQSLEER LLAMEQRQAD  180
VVASVRDIQQ RRRGDVHPGQ QTMLELEPTD HFSKKRRVPT IGFFAEEPAA AAEEQLRATG  240
GETPGMVMVN AEPFEKMELA LVSMEKLVQR AGNYAPSEDM FSAATASASA SAAPSTDDPA  300
HAGLQEAPVE TGVDLQPTSP ELAEPPGYAV QSPMLLFPEI QEDKRNTTAE VDMSSEASTT  360
DTSQDETNAE AETPH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45710.1	4e-58	HSF family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG051700.1