PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG050400.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 298aa    MW: 31902.4 Da    PI: 10.1787
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG050400.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA56.73.3e-18174208135
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       C +C t kTp+WR gp g+ktLCnaCG++y++ +l
  TRIDC1AG050400.2 174 CLHCETDKTPQWRTGPLGPKTLCNACGVRYKSGRL 208
                       99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
LCIKFWRTNE LFTVNAFYDQ LAELEWLSNY MGDDNFPTED LRKLQLISGI PSASSQTAPR  60
APAAAPVQPC GGGGAVGTAL WRSEAHAGQV SVPGKARSKR SRVAPCNWSS RLLVLAPAPA  120
SPPSPASAVI SPSESGTAFP LFPNKKPAKS SKKEAPAAPA MTAAEAAAAE GRRCLHCETD  180
KTPQWRTGPL GPKTLCNACG VRYKSGRLVP EYRPAASPTF VPSKHSNSHR KVVELRRQKD  240
APPQQLLHQP QQQQLGPGLG FHVPSPLLFD GPAAPHLGGG ADEFLIRNRI GPDHRQLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.11e-56GATA family protein