PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG050040.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 903aa MW: 99072.9 Da PI: 4.3511

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG050040.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	33.1	9.7e-11	252	298	6	52
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrR 52 f + e+L+++F ++yp+++ +e LA++lgLt rqV WF R TRIDC1AG050040.4 252 HFGPVINERLNQYFTTDQYPTRAVKESLAQELGLTFRQVNKWFESTR 298 566666789**********************************8766 PP
2	Homeobox	36.3	9.5e-12	732	772	13	53
HHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS Homeobox 13 eeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 ++L e F+ n+yps++ +e LA++lgLt rqV WF rR TRIDC1AG050040.4 732 QRLHEQFKTNQYPSRAVKESLAQELGLTFRQVEKWFESRRR 772 6899***********************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 903 aa Download sequence
MQNDVADLPS DDSEDDDFDP NIPEEHVAGH AEGSSEEDGD EGSDSDDSNF MTSSDNSEHV 60 KEKEKVDDLG LPSEDSEDDD YDPAGPDSDK DIEEKQDESD FTSDSDDFCA EIMKSCSKDE 120 VSSGPKVGGR TNDLEGAPVR PNTSMSHTKD LEIDQDVILP STKRQVQRLD YKKLYDDTYG 180 EAPSESSDGD DWSGKSTLKE DNEEGNEVDS FARKSPRGTR VVHPDGFHGL VNEQHAGGLT 240 SDGSNSKAKK RHFGPVINER LNQYFTTDQY PTRAVKESLA QELGLTFRQV NKWFESTRHA 300 RAAAMKNGAQ LEKHSNSRKK KSSDQPNACK EEGIRQDSPV KQETDGGQRA HMPPESSQSY 360 TKTSGLAGCP KSESRENHEK NTPLKYVGMP TDGSAEDQIL GLEPEDDGSD SDDPNFAIRS 420 GNSEPSKNRE KVDDLGLPSA YSEDDDYDSD EVIEMMQSSS DESDSNESNF TTSSDNPEDV 480 KEKVDDIGLP SEDSEDDDYD PAGPGSHEDI GKNQSSSDKS HSSDKSENRK TKRKADDLGL 540 PSEDSEDDDY DPASPDSDKD IEEKQDESDF SSDCDDFCVE IAKSCCGQEG VPSGAKVGGD 600 RTDDLEGTTI CANAAISNLP SKDPEMDQYV VLPVSARQKV QSPDSKKLAA YGKASSDSSY 660 GEELSKKCTP EKDNGKESEA GSFVRQSNEF TPQRSQQSFH GSVNGQNAEE LLTPNGSSTT 720 GQKRQYGPII NQRLHEQFKT NQYPSRAVKE SLAQELGLTF RQVEKWFESR RRHIRVASNK 780 SSTHVENHST KENPNVCKRD AVNEDTPSGS LNEGITQDGP LKQDIGGGLR TNASPPNSSQ 840 RYTTPLVRRP KGESRENHMK NTSSSSAGRP KGSDAGYAVL ALEAFDEKTR SKMLQELKKR 900 KIG

Sequence ? help Back to Top

Protein Sequence Length: 903 aa Download sequence

MQNDVADLPS DDSEDDDFDP NIPEEHVAGH AEGSSEEDGD EGSDSDDSNF MTSSDNSEHV  60
KEKEKVDDLG LPSEDSEDDD YDPAGPDSDK DIEEKQDESD FTSDSDDFCA EIMKSCSKDE  120
VSSGPKVGGR TNDLEGAPVR PNTSMSHTKD LEIDQDVILP STKRQVQRLD YKKLYDDTYG  180
EAPSESSDGD DWSGKSTLKE DNEEGNEVDS FARKSPRGTR VVHPDGFHGL VNEQHAGGLT  240
SDGSNSKAKK RHFGPVINER LNQYFTTDQY PTRAVKESLA QELGLTFRQV NKWFESTRHA  300
RAAAMKNGAQ LEKHSNSRKK KSSDQPNACK EEGIRQDSPV KQETDGGQRA HMPPESSQSY  360
TKTSGLAGCP KSESRENHEK NTPLKYVGMP TDGSAEDQIL GLEPEDDGSD SDDPNFAIRS  420
GNSEPSKNRE KVDDLGLPSA YSEDDDYDSD EVIEMMQSSS DESDSNESNF TTSSDNPEDV  480
KEKVDDIGLP SEDSEDDDYD PAGPGSHEDI GKNQSSSDKS HSSDKSENRK TKRKADDLGL  540
PSEDSEDDDY DPASPDSDKD IEEKQDESDF SSDCDDFCVE IAKSCCGQEG VPSGAKVGGD  600
RTDDLEGTTI CANAAISNLP SKDPEMDQYV VLPVSARQKV QSPDSKKLAA YGKASSDSSY  660
GEELSKKCTP EKDNGKESEA GSFVRQSNEF TPQRSQQSFH GSVNGQNAEE LLTPNGSSTT  720
GQKRQYGPII NQRLHEQFKT NQYPSRAVKE SLAQELGLTF RQVEKWFESR RRHIRVASNK  780
SSTHVENHST KENPNVCKRD AVNEDTPSGS LNEGITQDGP LKQDIGGGLR TNASPPNSSQ  840
RYTTPLVRRP KGESRENHMK NTSSSSAGRP KGSDAGYAVL ALEAFDEKTR SKMLQELKKR  900
KIG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19510.1	3e-11	HB-PHD family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG050040.4