PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG050040.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 600aa MW: 65625.5 Da PI: 4.5579

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG050040.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	37	5.7e-12	429	469	13	53
HHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS Homeobox 13 eeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 ++L e F+ n+yps++ +e LA++lgLt rqV WF rR TRIDC1AG050040.2 429 QRLHEQFKTNQYPSRAVKESLAQELGLTFRQVEKWFESRRR 469 6899***********************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 600 aa Download sequence
MKNGAQLEKH SNSRKKKSSD QPNACKEEGI RQDSPVKQET DGGQRAHMPP ESSQSYTKTS 60 GLAGCPKSES RENHEKNTPL KYVGMPTDGS AEDQILGLEP EDDGSDSDDP NFAIRSGNSE 120 PSKNREKVDD LGLPSAYSED DDYDSDEVIE MMQSSSDESD SNESNFTTSS DNPEDVKEKV 180 DDIGLPSEDS EDDDYDPAGP GSHEDIGKNQ SSSDKSHSSD KSENRKTKRK ADDLGLPSED 240 SEDDDYDPAS PDSDKDIEEK QDESDFSSDC DDFCVEIAKS CCGQEGVPSG AKVGGDRTDD 300 LEGTTICANA AISNLPSKDP EMDQYVVLPV SARQKVQSPD SKKLAQAYGK ASSDSSYGEE 360 LSKKCTPEKD NGKESEAGSF VRQSNEFTPQ RSQQSFHGSV NGQNAEELLT PNGSSTTGQK 420 RQYGPIINQR LHEQFKTNQY PSRAVKESLA QELGLTFRQV EKWFESRRRH IRVASNKSST 480 HVENHSTKEN PNVCKRDAVN EDTPSGSLNE GITQDGPLKQ DIGGGLRTNA SPPNSSQRYT 540 TPLVRRPKGE SRENHMKNTS SSSAGRPKGS DAGYAVLALE AFDEKTRSKM LQELKKRKIG

Sequence ? help Back to Top

Protein Sequence Length: 600 aa Download sequence

MKNGAQLEKH SNSRKKKSSD QPNACKEEGI RQDSPVKQET DGGQRAHMPP ESSQSYTKTS  60
GLAGCPKSES RENHEKNTPL KYVGMPTDGS AEDQILGLEP EDDGSDSDDP NFAIRSGNSE  120
PSKNREKVDD LGLPSAYSED DDYDSDEVIE MMQSSSDESD SNESNFTTSS DNPEDVKEKV  180
DDIGLPSEDS EDDDYDPAGP GSHEDIGKNQ SSSDKSHSSD KSENRKTKRK ADDLGLPSED  240
SEDDDYDPAS PDSDKDIEEK QDESDFSSDC DDFCVEIAKS CCGQEGVPSG AKVGGDRTDD  300
LEGTTICANA AISNLPSKDP EMDQYVVLPV SARQKVQSPD SKKLAQAYGK ASSDSSYGEE  360
LSKKCTPEKD NGKESEAGSF VRQSNEFTPQ RSQQSFHGSV NGQNAEELLT PNGSSTTGQK  420
RQYGPIINQR LHEQFKTNQY PSRAVKESLA QELGLTFRQV EKWFESRRRH IRVASNKSST  480
HVENHSTKEN PNVCKRDAVN EDTPSGSLNE GITQDGPLKQ DIGGGLRTNA SPPNSSQRYT  540
TPLVRRPKGE SRENHMKNTS SSSAGRPKGS DAGYAVLALE AFDEKTRSKM LQELKKRKIG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19510.1	9e-10	HB-PHD family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG050040.2