PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1AG049430.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | TCP | ||||||||
Protein Properties | Length: 284aa MW: 30401.9 Da PI: 6.9401 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 96.1 | 6.9e-30 | 50 | 123 | 3 | 71 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa.....s 71 g+kdrhsk+ T +g+RdRRvRls+++a++++dLqd+LG+ ++sk ++WLl++a+++i++l+ ++++++ s TRIDC1AG049430.2 50 GGKDRHSKVRTVKGLRDRRVRLSVPTAIQLYDLQDRLGLSQPSKVVDWLLNAAQHEIDKLPPLQFPPHdddllS 123 78*************************************************************88777222220 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 284 aa Download sequence |
MISAGDHGND RRKFEPAAAG NKALQAAAAA SRHWSASTES RIVRVSRVFG GKDRHSKVRT 60 VKGLRDRRVR LSVPTAIQLY DLQDRLGLSQ PSKVVDWLLN AAQHEIDKLP PLQFPPHDDD 120 LLSMAMVPPF SHATAAAASM MVVDSDKAAQ AHDGGGDLKG FMSLSNSLGL VNGAGASMPT 180 LAAAQAGSYH HHYAAHEAWS NGGNNVQEQL GGHRSSPHVV PHHGLPFPSL LSLAPVSQFV 240 FYTPEGGFAM KDVASDDQFP VDNLDDSQGQ LSLSSRGEAF FTQE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60970.1 | 4e-41 | TCP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1AG049430.2 |