PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG048820.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 708aa MW: 81838.5 Da PI: 7.0652

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG048820.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	51.7	2.9e-16	106	187	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY+++A +GF vr+ +++++ +k ++ C+++gk +++++ k++r+++ C+ak+ vk++ +++we + +++eHnH+l+p TRIDC1AG048820.3 106 RFYSTHAMLTGFAVRRGSNYRR------VKFDLECNRSGKLKPTEDL--KRKRRSNALGSRCQAKVIVKLH-NEQWEFIGVKHEHNHPLCP 187 5******************9......7889*******9988..555555566789*****9.9**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 708 aa Download sequence
MIREHASNGI GTAAQGLLAD ISDKQSNSVD PGMQQHAEEQ DQLHGVTQGH EMSSNDTSSG 60 SDSGSSSGSE LDTELGKCFY PSFEELENSR PPEIGMRFPT LEDAERFYST HAMLTGFAVR 120 RGSNYRRVKF DLECNRSGKL KPTEDLKRKR RSNALGSRCQ AKVIVKLHNE QWEFIGVKHE 180 HNHPLCPSPS LASFFLNHKY LSSEEKLFLR VLQQSRVNPR KAMNIFRRMR SNFGKVSSIK 240 EKDTSNSQCV NQWRKENSDV ETALKRFKEL ELRNLGFSYT MQKDEDNIVR SLFWTDARSN 300 VDYEIFGDFI SFNTTYSTNR HNMTFTPIIG MNNHGRILVF GCALLQDQKA ETFKWMFQTF 360 LHVMGGKLPR IVITDQDEGM ATAISEVMPQ VRHRFCKFSV MRKAQEILGA FMAARGNINA 420 ELHDLVDNSL TEKEFEEGWD FLTERYDASE NEYLRLMWET RKNWVPVYFQ ADFCPFVESA 480 GYFEGTNLLF KDNVLPKDRI EKFIEQYERM QEHIVKTEEE DALQSATEPA YFSMQPIEKH 540 AARIYTRQIF LRAQNELYYS TAFNVHEIQG GHRLEKVFNY ENPEFSRNSF EVLAEPGTHA 600 FKCQCAKFTR DGILCCHIFR VFTQLGVKEI PAQYMLPRWA PKFIEERLKE YEERCSKRTE 660 NKTRYAMLLG KMAEIGKGIC ADGAKSGCFM LELDKVQETF RSDGGRKS

Sequence ? help Back to Top

Protein Sequence Length: 708 aa Download sequence

MIREHASNGI GTAAQGLLAD ISDKQSNSVD PGMQQHAEEQ DQLHGVTQGH EMSSNDTSSG  60
SDSGSSSGSE LDTELGKCFY PSFEELENSR PPEIGMRFPT LEDAERFYST HAMLTGFAVR  120
RGSNYRRVKF DLECNRSGKL KPTEDLKRKR RSNALGSRCQ AKVIVKLHNE QWEFIGVKHE  180
HNHPLCPSPS LASFFLNHKY LSSEEKLFLR VLQQSRVNPR KAMNIFRRMR SNFGKVSSIK  240
EKDTSNSQCV NQWRKENSDV ETALKRFKEL ELRNLGFSYT MQKDEDNIVR SLFWTDARSN  300
VDYEIFGDFI SFNTTYSTNR HNMTFTPIIG MNNHGRILVF GCALLQDQKA ETFKWMFQTF  360
LHVMGGKLPR IVITDQDEGM ATAISEVMPQ VRHRFCKFSV MRKAQEILGA FMAARGNINA  420
ELHDLVDNSL TEKEFEEGWD FLTERYDASE NEYLRLMWET RKNWVPVYFQ ADFCPFVESA  480
GYFEGTNLLF KDNVLPKDRI EKFIEQYERM QEHIVKTEEE DALQSATEPA YFSMQPIEKH  540
AARIYTRQIF LRAQNELYYS TAFNVHEIQG GHRLEKVFNY ENPEFSRNSF EVLAEPGTHA  600
FKCQCAKFTR DGILCCHIFR VFTQLGVKEI PAQYMLPRWA PKFIEERLKE YEERCSKRTE  660
NKTRYAMLLG KMAEIGKGIC ADGAKSGCFM LELDKVQETF RSDGGRKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-75	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG048820.3