PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC1AG048820.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 836aa MW: 95224.4 Da PI: 7.1412

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG048820.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	51.4	3.7e-16	234	315	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY+++A +GF vr+ +++++ +k ++ C+++gk +++++ k++r+++ C+ak+ vk++ +++we + +++eHnH+l+p TRIDC1AG048820.1 234 RFYSTHAMLTGFAVRRGSNYRR------VKFDLECNRSGKLKPTEDL--KRKRRSNALGSRCQAKVIVKLH-NEQWEFIGVKHEHNHPLCP 315 5******************9......7889*******9988..555555566789*****9.9**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 836 aa Download sequence
SRRAASALPF RRHLLLRSPL PPPSASPLSP SAAICFSARP LAGRSRSEHT QVPNQEQRAA 60 ADARMQAAAD NLGEQAPGPV PATNSEQIAM TYPDRAVEPN HSVAEVHLEK ENVGKQAMPG 120 GGLQLTGGND QEHASNGIGT AAQGLLADIS DKQSNSVDPG MQQHAEEQDQ LHGVTQGHEM 180 SSNDTSSGSD SGSSSGSELD TELGKCFYPS FEELENSRPP EIGMRFPTLE DAERFYSTHA 240 MLTGFAVRRG SNYRRVKFDL ECNRSGKLKP TEDLKRKRRS NALGSRCQAK VIVKLHNEQW 300 EFIGVKHEHN HPLCPSPSLA SFFLNHKYLS SEEKLFLRVL QQSRVNPRKA MNIFRRMRSN 360 FGKVSSIKEK DTSNSQCVNQ WRKENSDVET ALKRFKELEL RNLGFSYTMQ KDEDNIVRSL 420 FWTDARSNVD YEIFGDFISF NTTYSTNRHN MTFTPIIGMN NHGRILVFGC ALLQDQKAET 480 FKWMFQTFLH VMGGKLPRIV ITDQDEGMAT AISEVMPQVR HRFCKFSVMR KAQEILGAFM 540 AARGNINAEL HDLVDNSLTE KEFEEGWDFL TERYDASENE YLRLMWETRK NWVPVYFQAD 600 FCPFVESAGY FEGTNLLFKD NVLPKDRIEK FIEQYERMQE HIVKTEEEDA LQSATEPAYF 660 SMQPIEKHAA RIYTRQIFLR AQNELYYSTA FNVHEIQGGH RLEKVFNYEN PEFSRNSFEV 720 LAEPGTHAFK CQCAKFTRDG ILCCHIFRVF TQLGVKEIPA QYMLPRWAPK FIEERLKEYE 780 ERCSKRTENK TRYAMLLGKM AEIGKGICAD GAKSGCFMLE LDKVQETFRS DGGRKS

Sequence ? help Back to Top

Protein Sequence Length: 836 aa Download sequence

SRRAASALPF RRHLLLRSPL PPPSASPLSP SAAICFSARP LAGRSRSEHT QVPNQEQRAA  60
ADARMQAAAD NLGEQAPGPV PATNSEQIAM TYPDRAVEPN HSVAEVHLEK ENVGKQAMPG  120
GGLQLTGGND QEHASNGIGT AAQGLLADIS DKQSNSVDPG MQQHAEEQDQ LHGVTQGHEM  180
SSNDTSSGSD SGSSSGSELD TELGKCFYPS FEELENSRPP EIGMRFPTLE DAERFYSTHA  240
MLTGFAVRRG SNYRRVKFDL ECNRSGKLKP TEDLKRKRRS NALGSRCQAK VIVKLHNEQW  300
EFIGVKHEHN HPLCPSPSLA SFFLNHKYLS SEEKLFLRVL QQSRVNPRKA MNIFRRMRSN  360
FGKVSSIKEK DTSNSQCVNQ WRKENSDVET ALKRFKELEL RNLGFSYTMQ KDEDNIVRSL  420
FWTDARSNVD YEIFGDFISF NTTYSTNRHN MTFTPIIGMN NHGRILVFGC ALLQDQKAET  480
FKWMFQTFLH VMGGKLPRIV ITDQDEGMAT AISEVMPQVR HRFCKFSVMR KAQEILGAFM  540
AARGNINAEL HDLVDNSLTE KEFEEGWDFL TERYDASENE YLRLMWETRK NWVPVYFQAD  600
FCPFVESAGY FEGTNLLFKD NVLPKDRIEK FIEQYERMQE HIVKTEEEDA LQSATEPAYF  660
SMQPIEKHAA RIYTRQIFLR AQNELYYSTA FNVHEIQGGH RLEKVFNYEN PEFSRNSFEV  720
LAEPGTHAFK CQCAKFTRDG ILCCHIFRVF TQLGVKEIPA QYMLPRWAPK FIEERLKEYE  780
ERCSKRTENK TRYAMLLGKM AEIGKGICAD GAKSGCFMLE LDKVQETFRS DGGRKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-74	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG048820.1