PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG048720.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 693aa MW: 80310.3 Da PI: 7.2924

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG048720.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	51	4.8e-16	85	166	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY+++A +GF r+ +++k+ +k ++ C+++gk +++++ +++r+ ++ +C+ak+ vk++ +++we t +++eHnH+l+p TRIDC1AG048720.3 85 RFYSTHAMLTGFAARRGTNYKR------KKFHLLCNRSGKLKPTQDL--QRKRKVNVLGSQCQAKVIVKLH-NEQWEFTGVKHEHNHPLCP 166 5******************9......4678*******9988..88888889999******9.9**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 693 aa Download sequence
MLHKQTNSVD PTVQHAEEQD QLHDVTEGHE LCSNDTSSGS DAGSSSGSEL DTELGKCYYP 60 SIEALENSRP PEVGMKFPTL EDAERFYSTH AMLTGFAARR GTNYKRKKFH LLCNRSGKLK 120 PTQDLQRKRK VNVLGSQCQA KVIVKLHNEQ WEFTGVKHEH NHPLCPSPSL TSFFLDHKYL 180 SSEEKLFLRV LQQSRVNPRK AMNIFQRMRS NFGNVSSSNE KDMSNSQRVD QWRKENSDVE 240 TALKRFKELE LRNLGFSYTM QKDEDNIVRS LFWTDARSKV DYEIFGDFIS FSTSYSTNRH 300 NMPFTPIIGV NNHGRILVFG CALLQDQKAE TFKWMFQTFL HVMRGKLPKT IIIDQDEGMV 360 KAIAEVMPQV RHRLCKFSVM RKAQEMLGAF MAARGNMNAE LHSLVDNSLT EKEFEEGWAV 420 LIERYDASEN EYLRLMWKTR KNWVPVYFQA DFYPFVESAE HGEGSNLLFK DNVLPKDRIE 480 KFIEQYERIQ EGIVKTEEED TLQSATEPAY FSMQPIEKHA ARIYTRQIFL RVQKELYYST 540 ALNAHEIQGG AAYRLEKVFD YENPEFDRNS FEVLVDPGTH TFKCQCAKFT RDGILCCHIF 600 RVFTQLGVIE IPAQYIVPRW AREFREERLK EYEEKCSKRT EERKRCVMLL GKMADIGKGI 660 CADSAKSGCF MLELDKVQEK LVGADGQIVL WSK

Sequence ? help Back to Top

Protein Sequence Length: 693 aa Download sequence

MLHKQTNSVD PTVQHAEEQD QLHDVTEGHE LCSNDTSSGS DAGSSSGSEL DTELGKCYYP  60
SIEALENSRP PEVGMKFPTL EDAERFYSTH AMLTGFAARR GTNYKRKKFH LLCNRSGKLK  120
PTQDLQRKRK VNVLGSQCQA KVIVKLHNEQ WEFTGVKHEH NHPLCPSPSL TSFFLDHKYL  180
SSEEKLFLRV LQQSRVNPRK AMNIFQRMRS NFGNVSSSNE KDMSNSQRVD QWRKENSDVE  240
TALKRFKELE LRNLGFSYTM QKDEDNIVRS LFWTDARSKV DYEIFGDFIS FSTSYSTNRH  300
NMPFTPIIGV NNHGRILVFG CALLQDQKAE TFKWMFQTFL HVMRGKLPKT IIIDQDEGMV  360
KAIAEVMPQV RHRLCKFSVM RKAQEMLGAF MAARGNMNAE LHSLVDNSLT EKEFEEGWAV  420
LIERYDASEN EYLRLMWKTR KNWVPVYFQA DFYPFVESAE HGEGSNLLFK DNVLPKDRIE  480
KFIEQYERIQ EGIVKTEEED TLQSATEPAY FSMQPIEKHA ARIYTRQIFL RVQKELYYST  540
ALNAHEIQGG AAYRLEKVFD YENPEFDRNS FEVLVDPGTH TFKCQCAKFT RDGILCCHIF  600
RVFTQLGVIE IPAQYIVPRW AREFREERLK EYEEKCSKRT EERKRCVMLL GKMADIGKGI  660
CADSAKSGCF MLELDKVQEK LVGADGQIVL WSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	3e-82	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG048720.3