PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG048720.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 776aa MW: 89093.8 Da PI: 6.8876

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG048720.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	50.8	5.6e-16	168	249	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY+++A +GF r+ +++k+ +k ++ C+++gk +++++ +++r+ ++ +C+ak+ vk++ +++we t +++eHnH+l+p TRIDC1AG048720.1 168 RFYSTHAMLTGFAARRGTNYKR------KKFHLLCNRSGKLKPTQDL--QRKRKVNVLGSQCQAKVIVKLH-NEQWEFTGVKHEHNHPLCP 249 5******************9......4678*******9988..88888889999******9.9**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 776 aa Download sequence
MHSSDNCGKQ TSGPAHATNF ERVVMTYQDR AVEPSHSGEG LRVEKEHAGK QANPEGSQQP 60 IGEINQENAS NGIGTTVQGL LADMLHKQTN SVDPTVQHAE EQDQLHDVTE GHELCSNDTS 120 SGSDAGSSSG SELDTELGKC YYPSIEALEN SRPPEVGMKF PTLEDAERFY STHAMLTGFA 180 ARRGTNYKRK KFHLLCNRSG KLKPTQDLQR KRKVNVLGSQ CQAKVIVKLH NEQWEFTGVK 240 HEHNHPLCPS PSLTSFFLDH KYLSSEEKLF LRVLQQSRVN PRKAMNIFQR MRSNFGNVSS 300 SNEKDMSNSQ RVDQWRKENS DVETALKRFK ELELRNLGFS YTMQKDEDNI VRSLFWTDAR 360 SKVDYEIFGD FISFSTSYST NRHNMPFTPI IGVNNHGRIL VFGCALLQDQ KAETFKWMFQ 420 TFLHVMRGKL PKTIIIDQDE GMVKAIAEVM PQVRHRLCKF SVMRKAQEML GAFMAARGNM 480 NAELHSLVDN SLTEKEFEEG WAVLIERYDA SENEYLRLMW KTRKNWVPVY FQADFYPFVE 540 SAEHGEGSNL LFKDNVLPKD RIEKFIEQYE RIQEGIVKTE EEDTLQSATE PAYFSMQPIE 600 KHAARIYTRQ IFLRVQKELY YSTALNAHEI QGGAAYRLEK VFDYENPEFD RNSFEVLVDP 660 GTHTFKCQCA KFTRDGILCC HIFRVFTQLG VIEIPAQYIV PRWAREFREE RLKEYEEKCS 720 KRTEERKRCV MLLGKMADIG KGICADSAKS GCFMLELDKV QEKLVGADGQ IVLWSK

Sequence ? help Back to Top

Protein Sequence Length: 776 aa Download sequence

MHSSDNCGKQ TSGPAHATNF ERVVMTYQDR AVEPSHSGEG LRVEKEHAGK QANPEGSQQP  60
IGEINQENAS NGIGTTVQGL LADMLHKQTN SVDPTVQHAE EQDQLHDVTE GHELCSNDTS  120
SGSDAGSSSG SELDTELGKC YYPSIEALEN SRPPEVGMKF PTLEDAERFY STHAMLTGFA  180
ARRGTNYKRK KFHLLCNRSG KLKPTQDLQR KRKVNVLGSQ CQAKVIVKLH NEQWEFTGVK  240
HEHNHPLCPS PSLTSFFLDH KYLSSEEKLF LRVLQQSRVN PRKAMNIFQR MRSNFGNVSS  300
SNEKDMSNSQ RVDQWRKENS DVETALKRFK ELELRNLGFS YTMQKDEDNI VRSLFWTDAR  360
SKVDYEIFGD FISFSTSYST NRHNMPFTPI IGVNNHGRIL VFGCALLQDQ KAETFKWMFQ  420
TFLHVMRGKL PKTIIIDQDE GMVKAIAEVM PQVRHRLCKF SVMRKAQEML GAFMAARGNM  480
NAELHSLVDN SLTEKEFEEG WAVLIERYDA SENEYLRLMW KTRKNWVPVY FQADFYPFVE  540
SAEHGEGSNL LFKDNVLPKD RIEKFIEQYE RIQEGIVKTE EEDTLQSATE PAYFSMQPIE  600
KHAARIYTRQ IFLRVQKELY YSTALNAHEI QGGAAYRLEK VFDYENPEFD RNSFEVLVDP  660
GTHTFKCQCA KFTRDGILCC HIFRVFTQLG VIEIPAQYIV PRWAREFREE RLKEYEEKCS  720
KRTEERKRCV MLLGKMADIG KGICADSAKS GCFMLELDKV QEKLVGADGQ IVLWSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	8e-82	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG048720.1