PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG045760.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 459aa MW: 50605.2 Da PI: 4.933

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG045760.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.8	3.4e-15	42	89	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed +l +vk++G +W+ + + g+ R++k+c++rw ++l TRIDC1AG045760.1 42 KGPWTPAEDAILEAYVKKHGVQNWNVVQKDTGLLRCGKSCRLRWANHL 89 79****************************99********9986 PP
2	Myb_DNA-binding	49.7	8.2e-16	95	138	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g +T+eE+ l+++++ ++G++ W++ a++++ gRt++++k++w++ TRIDC1AG045760.1 95 KGTFTKEEENLIIKLHSKMGNK-WARMAARLP-GRTDNEIKNYWNT 138 799*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 459 aa Download sequence
MTRAKSENDR VMPGPDQVDL ASHDDDSARE SPRRRAGPQL KKGPWTPAED AILEAYVKKH 60 GVQNWNVVQK DTGLLRCGKS CRLRWANHLR PDLKKGTFTK EEENLIIKLH SKMGNKWARM 120 AARLPGRTDN EIKNYWNTRI KKCQRTSTPI YPAEICLQAS NEDQHESADF SFSEKLANDL 180 LHGNGLYDPS STWGDFIDDQ EALSYAPQLP DVSFSNLPGL YFESTNHGFV DQVNQAEVLK 240 ESEISFPWLN AAINGTFDGS HAFSNGNFST SRPMTGPWKM ELPSFQFAGS DPNNWSAYSR 300 TCAAQGANFA DPCMRSSAAM ASAKFEHMCM IPGNSGQLEE PLPEAHAVSS AENQQLSVGS 360 SSASTGSPCD AMVETSELHF LERDPNLYAL VNSCSPASPL CQASPDELPC SDFSSAASPV 420 FVSDEPTILQ YEKGFLLPHP EDSGADAFSH WNAMPPIFQ

Sequence ? help Back to Top

Protein Sequence Length: 459 aa Download sequence

MTRAKSENDR VMPGPDQVDL ASHDDDSARE SPRRRAGPQL KKGPWTPAED AILEAYVKKH  60
GVQNWNVVQK DTGLLRCGKS CRLRWANHLR PDLKKGTFTK EEENLIIKLH SKMGNKWARM  120
AARLPGRTDN EIKNYWNTRI KKCQRTSTPI YPAEICLQAS NEDQHESADF SFSEKLANDL  180
LHGNGLYDPS STWGDFIDDQ EALSYAPQLP DVSFSNLPGL YFESTNHGFV DQVNQAEVLK  240
ESEISFPWLN AAINGTFDGS HAFSNGNFST SRPMTGPWKM ELPSFQFAGS DPNNWSAYSR  300
TCAAQGANFA DPCMRSSAAM ASAKFEHMCM IPGNSGQLEE PLPEAHAVSS AENQQLSVGS  360
SSASTGSPCD AMVETSELHF LERDPNLYAL VNSCSPASPL CQASPDELPC SDFSSAASPV  420
FVSDEPTILQ YEKGFLLPHP EDSGADAFSH WNAMPPIFQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06100.1	2e-64	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG045760.1