PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG045230.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 469aa    MW: 49567.3 Da    PI: 6.5042
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG045230.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS282.89.6e-87944602374
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       + lL+ecA a+s g+l+ a+ +L +ls++asp++ +  +Rl+ayf++A+aarl++s+ ++++ ++ps++s  + s + aa+++f++v P+ + 
  TRIDC1AG045230.1  94 IALLMECAVAMSVGNLADANGTLLELSQMASPYApSCGERLVAYFARAMAARLMSSWVGVCAPVHPSSAS--SWSGVHAAFRAFHNVAPFARC 184
                       689*******************************8889***********************999888887..477777899************ PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqG..lQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak 184
                       ++l++NqaIl+a+ g++ vH++D+d+  G  lQW++Ll aLa+Rp+gpp lR+Tg+g     s+ +l+  g +La +A++lg+pfef +++ +
  TRIDC1AG045230.1 185 AYLACNQAILDAFRGKRLVHVVDLDVVPGgaLQWLPLLSALAARPGGPPVLRVTGFGV----SASALHDAGTQLAGLATKLGMPFEFYAVAKR 273
                       **************************988447**************************....9**************************6555 PP

              GRAS 185 rledl.eleeLrvkp.gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe...adhnsesFlerflealeyysalfdsle 272
                         e +  + +L  ++ gE++aV++    h l+d  ++       +++l++ l+Pkvv++veqe   a  ++++Fl+rf+ al++ysa+fd+l 
  TRIDC1AG045230.1 274 PGEVVdAVADLPSRRpGEVVAVHWLR--HALYDAAGDDVV----TMRLLRWLEPKVVTLVEQErgpAGGDGGQFLDRFVAALHHYSAVFDALG 360
                       5555556889977767********98..888877777766....9******************766666889********************6 PP

              GRAS 273 aklpres.eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslv.lgW 362
                       a  p++    r++vE+ +lgrei nv+a +g  r  r e +++W++ l + GF     +  a+  a+ l   ++ + gy+v ++++  v lgW
  TRIDC1AG045230.1 361 AARPADGdASRHMVENGVLGREIGNVLAVAGPTRSGR-ELFGSWQAELARNGFL----RAGAVGRAQVLAGACPaGLGYTVADDHDGTVrLGW 448
                       6666665499***********************8877.56*************5....5668899999******999*****88666666*** PP

              GRAS 363 kdrpLvsvSaWr 374
                       k+ pL++vS W+
  TRIDC1AG045230.1 449 KGTPLYAVSTWT 460
                       ***********6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 469 aa     Download sequence    
MQFHDHHQYM YGSSTGPFLP QHHGFIHPEE DRCTGKVVPG LAEPAAAGVA EEVEFDGCKE  60
GGGDVAAVGQ ERQQHEDAPK PGEEEKEAHG VRMIALLMEC AVAMSVGNLA DANGTLLELS  120
QMASPYAPSC GERLVAYFAR AMAARLMSSW VGVCAPVHPS SASSWSGVHA AFRAFHNVAP  180
FARCAYLACN QAILDAFRGK RLVHVVDLDV VPGGALQWLP LLSALAARPG GPPVLRVTGF  240
GVSASALHDA GTQLAGLATK LGMPFEFYAV AKRPGEVVDA VADLPSRRPG EVVAVHWLRH  300
ALYDAAGDDV VTMRLLRWLE PKVVTLVEQE RGPAGGDGGQ FLDRFVAALH HYSAVFDALG  360
AARPADGDAS RHMVENGVLG REIGNVLAVA GPTRSGRELF GSWQAELARN GFLRAGAVGR  420
AQVLAGACPA GLGYTVADDH DGTVRLGWKG TPLYAVSTWT CCTTPHARA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.12e-92GRAS family protein