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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | TRIDC1AG044920.5 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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| Family | B3 | ||||||||
| Protein Properties | Length: 273aa MW: 30949.6 Da PI: 9.9627 | ||||||||
| Description | B3 family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | B3 | 59.3 | 6.7e-19 | 114 | 203 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93
f+k++++s+v++ +l lp +f+++h ++ ++ +++lede+g +++ + +++ + l++GW++F ++L++gD++vF+l + ++f +
TRIDC1AG044920.5 114 FVKTMVRSHVSSCFWLGLPSSFCKDHL-PP-REHKMVLEDEEGVEFDAVY--IGNRTG--LSGGWRGFSMHHDLEDGDSLVFELAEPDRF--K 198
89*********************9994.44.4459***************..555444..***********************9876777..7 PP
EEEE- CS
B3 94 vkvfr 98
+ +f+
TRIDC1AG044920.5 199 IYIFK 203
77776 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 273 aa Download sequence |
TTSSTSRDLG ISKMAKSLIQ ATRQQDKTPR ASPKSRKKFE ATTEVRRSSR ARTTVSYKDD 60 FPELDDFVRR RRISKSVDNG RGYTGRISSY QQQQRAFKRA EKLQDSLDPD NPSFVKTMVR 120 SHVSSCFWLG LPSSFCKDHL PPREHKMVLE DEEGVEFDAV YIGNRTGLSG GWRGFSMHHD 180 LEDGDSLVFE LAEPDRFKIY IFKAIEDGKE AEPNDKNTDV DSDSAQEVPD QTDSPVSEPP 240 SSPEPLKGAK RRKLPSSPEP LKGAKRRKLR GRR |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 246 | 252 | LKGAKRR |
| 2 | 250 | 268 | KRRKLPSSPEPLKGAKRRK |
| 3 | 251 | 269 | KRRKLPSSPEPLKGAKRRK |
| 4 | 261 | 267 | LKGAKRR |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT5G58280.1 | 6e-44 | B3 family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | TRIDC1AG044920.5 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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