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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | TRIDC1AG044920.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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| Family | B3 | ||||||||
| Protein Properties | Length: 290aa MW: 32937.8 Da PI: 9.7782 | ||||||||
| Description | B3 family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | B3 | 59.1 | 7.6e-19 | 131 | 220 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93
f+k++++s+v++ +l lp +f+++h ++ ++ +++lede+g +++ + +++ + l++GW++F ++L++gD++vF+l + ++f +
TRIDC1AG044920.1 131 FVKTMVRSHVSSCFWLGLPSSFCKDHL-PP-REHKMVLEDEEGVEFDAVY--IGNRTG--LSGGWRGFSMHHDLEDGDSLVFELAEPDRF--K 215
89*********************9994.44.4459***************..555444..***********************9876777..7 PP
EEEE- CS
B3 94 vkvfr 98
+ +f+
TRIDC1AG044920.1 216 IYIFK 220
77776 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 290 aa Download sequence |
ASGAGAAYEE ERRKRILDNL KHLEDLGISK MAKSLIQATR QQDKTPRASP KSRKKFEATT 60 EVRRSSRART TVSYKDDFPE LDDFVRRRRI SKSVDNGRGY TGRISSYQQQ QRAFKRAEKL 120 QDSLDPDNPS FVKTMVRSHV SSCFWLGLPS SFCKDHLPPR EHKMVLEDEE GVEFDAVYIG 180 NRTGLSGGWR GFSMHHDLED GDSLVFELAE PDRFKIYIFK AIEDGKEAEP NDKNTDVDSD 240 SAQEVPDQTD SPVSEPPSSP EPLKGAKRRK LPSSPEPLKG AKRRKLRGRR |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 263 | 269 | LKGAKRR |
| 2 | 267 | 285 | KRRKLPSSPEPLKGAKRRK |
| 3 | 268 | 286 | KRRKLPSSPEPLKGAKRRK |
| 4 | 278 | 284 | LKGAKRR |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT5G58280.1 | 2e-44 | B3 family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | TRIDC1AG044920.1 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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