PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC1AG044720.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WRKY

Protein Properties

Length: 290aa MW: 32330.8 Da PI: 5.933

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG044720.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	61	2.2e-19	136	197	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-.SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkvers.aedpkvveitYegeHnhe 59 +D ++WrKYG K++ ++fpr YYrC ++ +Cp+kk v+++ ++dp ++ +t ++H+++ TRIDC1AG044720.1 136 NDRFHWRKYGEKKILHADFPRLYYRCGYSdehKCPAKKYVQQQnSSDPPMFLVTLINDHTCD 197 79***********************998899***875167***********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 290 aa Download sequence
MAMRPKSEMS PPPAPPSPSD QRDAVIEELR KGSQLAEFLR QQVELIPEDS RRDAALANVT 60 DITTALASSL SVLQSEREQY YCSSSSDAGH ASGASGGGGV RNGAVARTRN RKAKHRRGTY 120 GEELPIKEIL TEAPENDRFH WRKYGEKKIL HADFPRLYYR CGYSDEHKCP AKKYVQQQNS 180 SDPPMFLVTL INDHTCDTLF PDEDQDQPPS SSSSANNSQV LDFSKASLSS AVGISRLKKE 240 EDADMSVTVP SYNYTYDELS SSSLPFLSPK QWEMEMEVKS LFRRHSGDGN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	110	117	NRKAKHRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40740.1	1e-16	WRKY family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG044720.1