PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG043130.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YB
Protein Properties Length: 180aa    MW: 18835 Da    PI: 5.8382
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG043130.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB185.83.2e-5832128197
             NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrel 93 
                       vreqdrflPian+srimkk++Pan+ki+kdaketvqecvsefisf+tseasdkcqrekrktingddllwa+atlGfe+y+eplkvyl+kyre+
  TRIDC1AG043130.5  32 VREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEEYIEPLKVYLQKYRET 124
                       69******************************************************************************************* PP

             NF-YB  94 egek 97 
                       eg++
  TRIDC1AG043130.5 125 EGDS 128
                       **97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MSDEAASPPG GGGGGGGGGS DDGGGGGGFG GVREQDRFLP IANISRIMKK AIPANGKIAK  60
DAKETVQECV SEFISFITSE ASDKCQREKR KTINGDDLLW AMATLGFEEY IEPLKVYLQK  120
YRETEGDSKL AGKSGDVSVK KDALGPHGGA SGTSAQGMGQ QVAYNPGMVY MQPQHESSRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37060.14e-68NF-YB family protein