PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1AG041580.11 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | LSD | ||||||||
Protein Properties | Length: 35aa MW: 3671.23 Da PI: 8.7668 | ||||||||
Description | LSD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-LSD1 | 31 | 4.2e-10 | 2 | 20 | 7 | 25 |
zf-LSD1 7 lLsYPrGApsVRCalCdtV 25 lL+Y +GA+sV+Ca+C +V TRIDC1AG041580.11 2 LLMYQYGARSVKCAVCSFV 20 8***************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 35 aa Download sequence |
MLLMYQYGAR SVKCAVCSFV TSVGASSGAE QKPSN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G32540.1 | 3e-12 | LSD family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1AG041580.11 |