PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1AG039770.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NAC | ||||||||
Protein Properties | Length: 434aa MW: 47985.5 Da PI: 4.2609 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 159.4 | 1.4e-49 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 lppGfrFhPtd elv++yLk+k+ gkkl + e+i+ev++yk+ PwdLp k ++++++ ew+fF++rdkky++g+r+nrat +gyWk++gkd++ TRIDC1AG039770.2 6 LPPGFRFHPTDVELVSYYLKRKIMGKKLFV-EAISEVELYKFAPWDLPdKsCLQSKDLEWFFFCPRDKKYPKGSRTNRATPNGYWKTSGKDRT 97 79*************************999.89**************96347777888*********************************** PP NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 + +++ vglkktL+f++g+apkg++tdWvm ey++ TRIDC1AG039770.2 98 IEL-NSRIVGLKKTLIFHEGKAPKGNRTDWVMYEYKM 133 ***.999****************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 434 aa Download sequence |
MAQTCLPPGF RFHPTDVELV SYYLKRKIMG KKLFVEAISE VELYKFAPWD LPDKSCLQSK 60 DLEWFFFCPR DKKYPKGSRT NRATPNGYWK TSGKDRTIEL NSRIVGLKKT LIFHEGKAPK 120 GNRTDWVMYE YKMEDETLVS AGFSKDAYVL CKIFKKSGLG PRIGEQYGAP FDENEWENLD 180 VGSSIFSFAP SSGVEDPQVE SSALATAIVI HEPSAPQQSV QFSEHVNICS DQVNDAPPEI 240 DGILLDELTK FLNDSPNHDV RSPENSGLPP MSELEAQAFE INTAELCDQL AVLAQSGDMP 300 AANFPASNGD VIENNLQQTN SGLAMDDDYI GLDDLFAPGE TFSYDFSGET FSYDLPGGTF 360 SYLSVPNNQF SQYPLDQSSN GLHYGDGATQ STFLASGPLP PLEPMPSTFD DMPSVSNKPA 420 SSYCLNPAMK DPFS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64060.1 | 5e-84 | NAC family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1AG039770.2 |