PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG039400.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 274aa    MW: 30332.9 Da    PI: 10.879
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG039400.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM162.61.4e-50972211128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                       lppGfrFhPtdeelv++yL+++++g ++++  +i+evd+yk++Pw+Lp+++  +ekewyfFs+rd+ky++g+r+nr++ +gyWkatg dk+v 
  TRIDC1AG039400.3  97 LPPGFRFHPTDEELVMHYLCRRCAGLPISV-PIIAEVDLYKFDPWQLPRMALYGEKEWYFFSPRDRKYPNGSRPNRSAGTGYWKATGADKPVG 188
                       79****************************.88***************7666789*************************************9 PP

               NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       +   +   +kk Lvfy g+apkg kt+W+mheyrl
  TRIDC1AG039400.3 189 T--PKPLAIKKALVFYAGKAPKGDKTNWIMHEYRL 221
                       9..7789**************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
ARPRAGSIYG ARAALRMLSC SPRPFQDQKE APRSSGPATS SATRSSGLFI CIWLIAAVWS  60
CQIRVASLAS RARRRIEEMS GGGGGAAATQ GQQDLQLPPG FRFHPTDEEL VMHYLCRRCA  120
GLPISVPIIA EVDLYKFDPW QLPRMALYGE KEWYFFSPRD RKYPNGSRPN RSAGTGYWKA  180
TGADKPVGTP KPLAIKKALV FYAGKAPKGD KTNWIMHEYR LADVDRSARK KNSLRVRPIL  240
PSDLRTVGGP NCARIIFNQS HLTLSSLASS RTIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.16e-92NAC family protein