PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG038320.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 236aa    MW: 27119.8 Da    PI: 10.4889
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG038320.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR181.21.8e-251196190
              FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
                      +fYn+YA +vGFsvrk  + ks++n  i +++f Csk g+++++k++    +r+ra tr+gC a++++k + +gk++v+++e  HnHel+
  TRIDC1AG038320.2 11 EFYNAYAGHVGFSVRKFWHDKSSMNV-IPTKKFICSKAGFKDKSKEQ---CQRKRADTRVGCMAEMTIKISGNGKYVVSSFEDAHNHELV 96
                      6*********************7666.99************998766...9999**********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MEFENDDIAY EFYNAYAGHV GFSVRKFWHD KSSMNVIPTK KFICSKAGFK DKSKEQCQRK  60
RADTRVGCMA EMTIKISGNG KYVVSSFEDA HNHELVTPSK AHLLRSQRRI TEAQKAQIDI  120
LNDSGIRPKS GHEVMSRQAG GRRCLSFGQK DKKRTDPVHR SSHTRWGLGR DYRNLVLPLQ  180
SAMQRGWFEP RTSWHKWGGL HHCARPALSF GQKDYKNYLR SKRMQSIQEG DTGAIL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-26FAR1 family protein