PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1AG038320.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | FAR1 | ||||||||
Protein Properties | Length: 280aa MW: 31884.9 Da PI: 9.9021 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 80.7 | 2.5e-25 | 49 | 134 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn+YA +vGFsvrk + ks++n i +++f Csk g+++++k++ +r+ra tr+gC a++++k + +gk++v+++e HnHel+ TRIDC1AG038320.1 49 EFYNAYAGHVGFSVRKFWHDKSSMNV-IPTKKFICSKAGFKDKSKEQ---CQRKRADTRVGCMAEMTIKISGNGKYVVSSFEDAHNHELV 134 6*********************7666.99************998766...9999**********************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 280 aa Download sequence |
MDGAPATSLS VDHDTTDVGE AGQNTDDDYS KRLKPEIGME FENDDIAYEF YNAYAGHVGF 60 SVRKFWHDKS SMNVIPTKKF ICSKAGFKDK SKEQCQRKRA DTRVGCMAEM TIKISGNGKY 120 VVSSFEDAHN HELVTPSKAH LLRSQRRITE AQKAQIDILN DSGIRPKSGH EVMSRQAGGR 180 RCLSFGQKDK KRTDPVHRSS HTRWGLGRDY RNLVLPLQSA MQRGWFEPRT SWHKWGGLHH 240 CARPALSFGQ KDYKNYLRSK RMQSIQEGDT GAILQYLQDK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 4e-28 | FAR1 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1AG038320.1 |