PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG032040.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 291aa    MW: 31195.4 Da    PI: 8.2862
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG032040.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH50.53.8e-16101146555
                       HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       hne Er+RRdriN+++++L++l+P++      K +Ka++L ++++++k+Lq
  TRIDC1AG032040.4 101 HNESERKRRDRINQKMQTLQKLVPNS-----SKTDKASMLDEVIDHLKQLQ 146
                       *************************8.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
ASQGSVAPGR GESSLLTLEP CGTGADDLCG FTTTNNSTSL DHGSPETENT SFGGGASDSR  60
CFSRRSQRDG LCDEAENVVI KGEAPMRSSI CTKRSRAAAI HNESERKRRD RINQKMQTLQ  120
KLVPNSSKTD KASMLDEVID HLKQLQATVQ MMNRMSSMMM PMAMPQLAQM SVMANMAQMA  180
QMAQMGLGMI NMAGPLAQPA YPGLTQPMMH TSTPFVTMQP WNAGAGADRQ KQPAAAAGAA  240
VPDAYSAFLA CQAAQQNAQQ AQPNGMEAYS RMMAMCQKLS QQQTKPGSSK E
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1105110ERKRRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00050.11e-29bHLH family protein