PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG031580.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 477aa    MW: 50624.1 Da    PI: 6.8871
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG031580.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS292.61e-891184762374
              GRAS   2 velLlecAeavssgdlelaqalLarlsel...aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPil 91 
                       v++L e+A++ ++gd+  a+++Larl+ +   a  +g+p+ R a+yf+eAL+  l+       ++ +p ++++++++ +l a+k+fsevsP+l
  TRIDC1AG031580.3 118 VDQLAEAAKFAEAGDAFGAREILARLNYRlpaAPAAGTPLLRSAFYFKEALRLALSP----NGETPAPPASTPYDVVLKLGAYKAFSEVSPVL 206
                       689*************************999455566*******************9....45566777778899****************** PP

              GRAS  92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak 184
                       +f+hlt+ qa+l+ + g+ ++H++Dfdi++G QW++L+q+La+R +++  l++T+++sp+s++  el+ ++e+L++fA+elgv f+f+v+   
  TRIDC1AG031580.3 207 QFAHLTCVQAVLDGLRGAGCIHVLDFDIGMGEQWASLMQELAQR-RPATALKVTALVSPASHHPLELQLIHENLSSFAAELGVFFQFTVF--- 295
                       *******************************************9.7889****************************************9... PP

              GRAS 185 rledleleeLrvkp.gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklp 276
                       ++++l++ +L     g+alaV+l +   +          + ++vL+lvksl +kvvv v++ +d+++ +F++++++a++  + l++s++a  +
  TRIDC1AG031580.3 296 NIDTLDPADLVAIAgGDALAVHLPVGAAHAA--------AMPAVLRLVKSLGAKVVVSVDRGCDRTELPFAAHLFQAFQSTVFLLESVDAV-G 379
                       999999999955555**********999997........4566*********************************************988.7 PP

              GRAS 277 reseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee.sgslvlgWkdrpLv 368
                       ++ +++ k+Er+l++++++++v  ++++    ++    Wr+ + +aGF+pv+ s++a++qa++ll+kv+++g+rve++  gsl+l+W++ +Lv
  TRIDC1AG031580.3 380 TDPDTAGKIERFLVQPAVEQCVVGRHRA--SIEKAPLPWRAVFASAGFTPVQASTFAESQAESLLHKVPVRGFRVEKRaPGSLCLYWQRAELV 470
                       888*******************987777..55556699**************************************88478999********* PP

              GRAS 369 svSaWr 374
                       svSaWr
  TRIDC1AG031580.3 471 SVSAWR 476
                       *****8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 477 aa     Download sequence    
LELDHATSMM SPPTASLGPS LSPFAPAMEE DAKGAPFGHA PSYLLHQHQH HPQPHAAFFG  60
AHPSFESAPP PPKRHHPMAG APAPKLPAFQ GHLAPAGGFF PALKPKAGTA NDEAAATVDQ  120
LAEAAKFAEA GDAFGAREIL ARLNYRLPAA PAAGTPLLRS AFYFKEALRL ALSPNGETPA  180
PPASTPYDVV LKLGAYKAFS EVSPVLQFAH LTCVQAVLDG LRGAGCIHVL DFDIGMGEQW  240
ASLMQELAQR RPATALKVTA LVSPASHHPL ELQLIHENLS SFAAELGVFF QFTVFNIDTL  300
DPADLVAIAG GDALAVHLPV GAAHAAAMPA VLRLVKSLGA KVVVSVDRGC DRTELPFAAH  360
LFQAFQSTVF LLESVDAVGT DPDTAGKIER FLVQPAVEQC VVGRHRASIE KAPLPWRAVF  420
ASAGFTPVQA STFAESQAES LLHKVPVRGF RVEKRAPGSL CLYWQRAELV SVSAWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.19e-85GRAS family protein