PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC1AG030500.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 104aa MW: 11871.7 Da PI: 10.0252

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG030500.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	42.3	1.7e-13	4	52	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W+ eEd+ll++ + ++G g +W + a+t+g+ R++ c+ rw++yl TRIDC1AG030500.1 4 KGKWSREEDDLLKKHIDKYGIGrSWQALAETLGLQRCGRGCRARWLNYL 52 79****************999***********************7 PP
2	Myb_DNA-binding	34.2	5.7e-11	59	100	2	45
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 g++T+ E+ ++ + + G+ W+ Ia+ ++ gRt+ +k++w+ TRIDC1AG030500.1 59 GNFTPAEESIICEMYSKRGSC-WSVIAAQLP-GRTDLAVKNYWN 100 89*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 104 aa Download sequence
MVKKGKWSRE EDDLLKKHID KYGIGRSWQA LAETLGLQRC GRGCRARWLN YLRPGLKHGN 60 FTPAEESIIC EMYSKRGSCW SVIAAQLPGR TDLAVKNYWN GTIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37780.1	1e-42	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG030500.1