PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG030400.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 296aa    MW: 31946.3 Da    PI: 10.1416
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG030400.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B393.71.3e-2934130185
                       EEEE-..-HHHHTT-EE--HHH.HTT............---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEE CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh............ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvv 81 
                       f+kv tpsdv+k++rlv+pk++ae++            +g+  +++ l++ed+ g+ W+++++y+++s++yv+tkGW++Fvk++ L +gD+v+
  TRIDC1AG030400.1  34 FEKVVTPSDVGKLNRLVIPKQHAERYfpldgaaaalaaEGSGGKGMVLSFEDRAGKAWRFRYSYWNSSQSYVMTKGWSRFVKEKSLGAGDTVL 126
                       99****************************999999996666799************************************************ PP

                       EEE- CS
                B3  82 Fkld 85 
                       F + 
  TRIDC1AG030400.1 127 FGRG 130
                       *943 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
RAKSMEFSPT APAGGEESER VCASSSVVEK EHMFEKVVTP SDVGKLNRLV IPKQHAERYF  60
PLDGAAAALA AEGSGGKGMV LSFEDRAGKA WRFRYSYWNS SQSYVMTKGW SRFVKEKSLG  120
AGDTVLFGRG VGDGAARDRL YIDFRRRRPA ESYSATVAFP PPATSSLSHR LPLLPSVPPF  180
CPWRRDFGTT YGVPPAASGS NRHVLFLRQQ VPAAVVLKSV PVRAAASVLE PPARPMPKRV  240
RLFGVNLDSP ATEDDGTCGV TQTVTSTLLQ QLLPSPSSST SSTAGKERQC SLDLGL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1144149FRRRRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61970.11e-46B3 family protein