PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC1AG029280.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 743aa MW: 80183.8 Da PI: 6.775

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG029280.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.9	1.5e-12	566	611	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr ++P+ K++Ka+ L A+ YI++L TRIDC1AG029280.1 566 NHVEAERQRREKLNQRFYALRAVVPNV-----SKMDKASLLGDAISYINEL 611 799*********************6.....5*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 743 aa Download sequence
LGLAPRLSSP PIHSHLSHLP LPTLPPRLLS LPPIHSPSSP SPDPGPGPGP MNLWTDDNAS 60 MMEAFMASAD MPAFPWGAAA TPPPPAAVPQ QPAFNQDTLQ QRLQAIIEGS RETWTYAIFW 120 QSSTDAGASL LGWGDGYYKG CDDADKRRQQ PTPASAAEQE HRKRVLRELN SLIAGGGAAA 180 PDEAVEEEVT DTEWFFLVSM TQSFPNGMGL PGQALFAGQP TWIATGLASA PCERARQAYT 240 FGLRTMVCIP LGTGVLELGA TEVIFQTNDS LGRIRSLFNL NGGGGGSGSW PPIAPPPQEA 300 ETDPSVLWLA DAPAGDMKES PPSVEISVSK PPQPQPPQIH QFENGSTSTL TENPGLSVHA 360 QQPPPQQAAA SAQRQNQHQL QHQHQLQLQH QHNQGPFRRE LNFSDFASNA SVTVTPPFFK 420 PESGEILNFG ADSTSRRNPS PAPPAATASL TTAPGSLFSQ HTATVTAPSN DAKNNPKRSM 480 EATSRASNTN HHQTATANEG MLSFSSAPTT RPSTGTGAPA KSESDHSDLE ASVREVESSR 540 VVPPPEEKRP RKRGRKPANG REEPLNHVEA ERQRREKLNQ RFYALRAVVP NVSKMDKASL 600 LGDAISYINE LRGKMTALES DKETLHSQIE ALKKERDARP AAPSSGMHDN GARCHAVEIE 660 AKILGLEAMI RVQCHKRNHP AAKLMTALRE LDLDVYHASV SVVKDIMIQQ VAVKMATRVY 720 SQDQLNAALY GRLAEPGTAM QIR

Sequence ? help Back to Top

Protein Sequence Length: 743 aa Download sequence

LGLAPRLSSP PIHSHLSHLP LPTLPPRLLS LPPIHSPSSP SPDPGPGPGP MNLWTDDNAS  60
MMEAFMASAD MPAFPWGAAA TPPPPAAVPQ QPAFNQDTLQ QRLQAIIEGS RETWTYAIFW  120
QSSTDAGASL LGWGDGYYKG CDDADKRRQQ PTPASAAEQE HRKRVLRELN SLIAGGGAAA  180
PDEAVEEEVT DTEWFFLVSM TQSFPNGMGL PGQALFAGQP TWIATGLASA PCERARQAYT  240
FGLRTMVCIP LGTGVLELGA TEVIFQTNDS LGRIRSLFNL NGGGGGSGSW PPIAPPPQEA  300
ETDPSVLWLA DAPAGDMKES PPSVEISVSK PPQPQPPQIH QFENGSTSTL TENPGLSVHA  360
QQPPPQQAAA SAQRQNQHQL QHQHQLQLQH QHNQGPFRRE LNFSDFASNA SVTVTPPFFK  420
PESGEILNFG ADSTSRRNPS PAPPAATASL TTAPGSLFSQ HTATVTAPSN DAKNNPKRSM  480
EATSRASNTN HHQTATANEG MLSFSSAPTT RPSTGTGAPA KSESDHSDLE ASVREVESSR  540
VVPPPEEKRP RKRGRKPANG REEPLNHVEA ERQRREKLNQ RFYALRAVVP NVSKMDKASL  600
LGDAISYINE LRGKMTALES DKETLHSQIE ALKKERDARP AAPSSGMHDN GARCHAVEIE  660
AKILGLEAMI RVQCHKRNHP AAKLMTALRE LDLDVYHASV SVVKDIMIQQ VAVKMATRVY  720
SQDQLNAALY GRLAEPGTAM QIR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	548	556	KRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32640.1	1e-150	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG029280.1