PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC1AG026930.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

YABBY

Protein Properties

Length: 273aa MW: 28898.6 Da PI: 8.5104

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG026930.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	80.7	4.3e-25	37	94	4	61
YABBY 4 fssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaes 61 seq+Cyv+C fC+t+l+vsvPs+slfk+vtvrCGhC+sll+v+++ ++++ TRIDC1AG026930.4 37 EAPSEQLCYVHCHFCDTVLVVSVPSSSLFKTVTVRCGHCSSLLTVDMRGLLFPTTTTT 94 5689******************************************998775554444 PP
2	YABBY	133.6	2.4e-41	190	253	108	170
YABBY 108 evprvpp.virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 +pr+ p v+rPPekrqrvPsaynrfik+eiqrika+nPdishreafsaaaknWahfP+ihfgl TRIDC1AG026930.4 190 PSPRTNPvVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGL 253 567877769*****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence
SSSGASAAFT PVSQQQQQMA SESLSSELQP PAPMQPEAPS EQLCYVHCHF CDTVLVVSVP 60 SSSLFKTVTV RCGHCSSLLT VDMRGLLFPT TTTTVAAESA ASAVTTTTSP PPAAAAHHGQ 120 FHYPSSLNLA PGNPPRHSLL DEISSANPSL QLLEQHGLGG LIAAAGGRNA AAPAPLPPPP 180 VAGGKGGKEP SPRTNPVVNR PPEKRQRVPS AYNRFIKDEI QRIKAGNPDI SHREAFSAAA 240 KNWAHFPHIH FGLMPDHQGL RKTSLLPQDY KLN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45190.1	1e-39	YABBY family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG026930.4