PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC1AG026930.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

YABBY

Protein Properties

Length: 297aa MW: 31394.4 Da PI: 8.5078

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG026930.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	80.5	5e-25	41	98	4	61
YABBY 4 fssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaes 61 seq+Cyv+C fC+t+l+vsvPs+slfk+vtvrCGhC+sll+v+++ ++++ TRIDC1AG026930.1 41 EAPSEQLCYVHCHFCDTVLVVSVPSSSLFKTVTVRCGHCSSLLTVDMRGLLFPTTTTT 98 5689******************************************998775554444 PP
2	YABBY	133.4	2.8e-41	194	257	108	170
YABBY 108 evprvpp.virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 +pr+ p v+rPPekrqrvPsaynrfik+eiqrika+nPdishreafsaaaknWahfP+ihfgl TRIDC1AG026930.1 194 PSPRTNPvVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGL 257 567877769*****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 297 aa Download sequence
MSSSSSSGAS AAFTPVSQQQ QQMASESLSS ELQPPAPMQP EAPSEQLCYV HCHFCDTVLV 60 VSVPSSSLFK TVTVRCGHCS SLLTVDMRGL LFPTTTTTVA AESAASAVTT TTSPPPAAAA 120 HHGQFHYPSS LNLAPGNPPR HSLLDEISSA NPSLQLLEQH GLGGLIAAAG GRNAAAPAPL 180 PPPPVAGGKG GKEPSPRTNP VVNRPPEKRQ RVPSAYNRFI KDEIQRIKAG NPDISHREAF 240 SAAAKNWAHF PHIHFGLMPD HQGLRKTSLL PQDHQRKDGH GLLKEGLYAA NMGIAPY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45190.1	2e-45	YABBY family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG026930.1