PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC1AG020970.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

E2F/DP

Protein Properties

Length: 277aa MW: 30705.7 Da PI: 8.9696

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG020970.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	85.3	4.5e-27	22	108	3	71
E2F_TDP 3 eksLrlltqkflklleksee.givtlnevakeLvse.....................dvknkrRRiYDilNVLealnliekkekneirwkg 71 +++Lr++++k ++ek+e g++t+neva+eLv+e d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg TRIDC1AG020970.3 22 NRGLRQFSMK---VCEKVEGkGRTTYNEVADELVAEfadpnsnigspdpdnpntqqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 108 689*****...*999********************************************************.*****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 277 aa Download sequence
SLRLSDKKKK KGTRVVGPDK GNRGLRQFSM KVCEKVEGKG RTTYNEVADE LVAEFADPNS 60 NIGSPDPDNP NTQQYDEKNI RRRVYDALNV LMAMDIISKD KKEIQWKGLP RTSLSDIDKL 120 KTEVIGLKGR IDKKSAYLQE LQDQYAGLQN LVERNGQLYG SGDAPSGGVA LPFILVQTRP 180 HATVEVEISE DMQLVHFDFN STPFELHDDS FVLKAMGFSG KEETDGTVAL VANAVECSSA 240 SNVYGRRSPQ PARPNGIRLR TSPPIPGILK GRVKHEH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	3	15	RLSDKKKKKGTRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03415.1	1e-123	E2F/DP family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG020970.3