PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG019980.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 211aa    MW: 24586 Da    PI: 9.0003
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG019980.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR146.99.2e-151392190
              FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
                      ++Yn Y+ e+GF +r  ks+++  +g   ++++ C++ gk+++ +++         ++rt+C  ++++ +++d+ w++ + +  HnHe+ 
  TRIDC1AG019980.1 13 DYYNLYSWECGFGIRYGKSRTN-VKGAKSMQELLCNCGGKPKKVNST---------SSRTECPTMIRLLRTEDDGWYICEYKVSHNHEML 92
                      69****************9998.7777999**********9987665.........9******************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MGLTFDSLGE AYDYYNLYSW ECGFGIRYGK SRTNVKGAKS MQELLCNCGG KPKKVNSTSS  60
RTECPTMIRL LRTEDDGWYI CEYKVSHNHE MLHTCAKKLH FPSHRHIDKY TRELVSQLRQ  120
NNVNLSNVYS IIGTFFGRIE NVPFTKRCMR TLCAKLSRDQ ADGDVKKTMD YFAELKQSDP  180
EFTYTVRVDN ESTVRTLIWT TGKSKLQYHY F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52520.11e-17FAR1 family protein