PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG018700.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 127aa MW: 14821 Da PI: 9.3267

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG018700.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.8	2.9e-19	38	84	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd+++++ vk++G+ W+tIa+ + gR +kqc++rw+++l TRIDC1AG018700.6 38 KGPWSKEEDDIIIQMVKKYGPTKWSTIAQALS-GRIGKQCRERWHNHL 84 79****************************.***********97 PP
2	Myb_DNA-binding	44	5.2e-14	90	126	1	39
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkq 39 +++WT+eE+ +l++a++ +G++ W+ ++ ++ gRt++ TRIDC1AG018700.6 90 KDAWTQEEEIRLIQAHHIYGNK-WAELSKFLP-GRTDNA 126 689*****************.*****.**97 PP

Sequence ? help Back to Top
Protein Sequence Length: 127 aa Download sequence
PCTLKTKRST VFAECFPDRT DVQCLHRWQK VLNPELVKGP WSKEEDDIII QMVKKYGPTK 60 WSTIAQALSG RIGKQCRERW HNHLNPGINK DAWTQEEEIR LIQAHHIYGN KWAELSKFLP 120 GRTDNAI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.1	9e-69	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG018700.6