PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC1AG015830.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 374aa MW: 41422.1 Da PI: 4.9009

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG015830.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44.6	2.7e-14	300	345	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h + Er+RR+++N++f Lr+l+P +K++Ka+iL ++eY+k+L TRIDC1AG015830.5 300 SHVMQERKRREKLNERFIVLRSLVPFV-----TKMDKASILGDTIEYVKQL 345 899*********************8.....8***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence
LIGCITNFGG NELQSAGIKT VVCIPIVDGV LEIGTTEKVE EDMGLVQYAM AIFMDQQETH 60 MISSICHSNQ TSHIDQQSFQ TQRKTSTGQP KPEPNKFNPE YEDDEMEYDD DEIDAECASG 120 SASHDDHATH NAGSSELMQV ETSERVRDGC SSNFGDEIQM LMVCQNSTDD HSNLHGQNEA 180 WHFLYEELCS GYPQSSAAGE NQAMAENAHY AQTLSLILHR NNALRQAGGL NTGSYLAVSL 240 QSSFSRWDAG IHGRTVAQGT TRQKMLKSVL LFFSAACNKP PGDPRCDDAG ARREVDFGAS 300 HVMQERKRRE KLNERFIVLR SLVPFVTKMD KASILGDTIE YVKQLTKRIQ DLESSTVRGP 360 AMSKEKRALP TGME

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence

LIGCITNFGG NELQSAGIKT VVCIPIVDGV LEIGTTEKVE EDMGLVQYAM AIFMDQQETH  60
MISSICHSNQ TSHIDQQSFQ TQRKTSTGQP KPEPNKFNPE YEDDEMEYDD DEIDAECASG  120
SASHDDHATH NAGSSELMQV ETSERVRDGC SSNFGDEIQM LMVCQNSTDD HSNLHGQNEA  180
WHFLYEELCS GYPQSSAAGE NQAMAENAHY AQTLSLILHR NNALRQAGGL NTGSYLAVSL  240
QSSFSRWDAG IHGRTVAQGT TRQKMLKSVL LFFSAACNKP PGDPRCDDAG ARREVDFGAS  300
HVMQERKRRE KLNERFIVLR SLVPFVTKMD KASILGDTIE YVKQLTKRIQ DLESSTVRGP  360
AMSKEKRALP TGME

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	305	310	ERKRRE
2	306	311	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09820.1	3e-25	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG015830.5