PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC1AG015830.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 345aa MW: 38500.7 Da PI: 5.1448

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG015830.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44.7	2.4e-14	271	316	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h + Er+RR+++N++f Lr+l+P +K++Ka+iL ++eY+k+L TRIDC1AG015830.4 271 SHVMQERKRREKLNERFIVLRSLVPFV-----TKMDKASILGDTIEYVKQL 316 899*********************8.....8***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
RDGRPVVALV EEDMGLVQYA MAIFMDQQET HMISSICHSN QTSHIDQQSF QTQRKTSTGQ 60 PKPEPNKFNP EYEDDEMEYD DDEIDAECAS GSASHDDHAT HNAGSSELMQ VETSERVRDG 120 CSSNFGDEIQ MLMVCQNSTD DHSNLHGQNE AWHFLYEELC SGYPQSSAAG ENQAMAENAH 180 YAQTLSLILH RNNALRQAGG LNTGSYLAVS LQSSFSRWDA GIHGRTVAQG TTRQKMLKSV 240 LLFFSAACNK PPGDPRCDDA GARREVDFGA SHVMQERKRR EKLNERFIVL RSLVPFVTKM 300 DKASILGDTI EYVKQLTKRI QDLESSTVRG PAMSKEKRAL PTGME

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

RDGRPVVALV EEDMGLVQYA MAIFMDQQET HMISSICHSN QTSHIDQQSF QTQRKTSTGQ  60
PKPEPNKFNP EYEDDEMEYD DDEIDAECAS GSASHDDHAT HNAGSSELMQ VETSERVRDG  120
CSSNFGDEIQ MLMVCQNSTD DHSNLHGQNE AWHFLYEELC SGYPQSSAAG ENQAMAENAH  180
YAQTLSLILH RNNALRQAGG LNTGSYLAVS LQSSFSRWDA GIHGRTVAQG TTRQKMLKSV  240
LLFFSAACNK PPGDPRCDDA GARREVDFGA SHVMQERKRR EKLNERFIVL RSLVPFVTKM  300
DKASILGDTI EYVKQLTKRI QDLESSTVRG PAMSKEKRAL PTGME

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	276	281	ERKRRE
2	277	282	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09820.1	3e-25	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG015830.4