PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG015830.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 431aa MW: 47575 Da PI: 5.9382

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG015830.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44.3	3.2e-14	258	303	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h + Er+RR+++N++f Lr+l+P +K++Ka+iL ++eY+k+L TRIDC1AG015830.2 258 SHVMQERKRREKLNERFIVLRSLVPFV-----TKMDKASILGDTIEYVKQL 303 899*********************8.....8***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 431 aa Download sequence
MGLVQYAMAI FMDQQETHMI SSICHSNQTS HIDQQSFQTQ RKTSTGQPKP EPNKFNPEYE 60 DDEMEYDDDE IDAECASGSA SHDDHATHNA GSSELMQVET SERVRDGCSS NFGDEIQMLM 120 VCQNSTDDHS NLHGQNEAWH FLYEELCSGY PQSSAAGENQ AMAENAHYAQ TLSLILHRNN 180 ALRQAGGLNT GSYLAVSLQS SFSRWDAGIH GRTVAQGTTR QKMLKSVLLF FSAACNKPPG 240 DPRCDDAGAR REVDFGASHV MQERKRREKL NERFIVLRSL VPFVTKMDKA SILGDTIEYV 300 KQLTKRIQDL ESSTVRGPAM SKEKRALPTG MEGASSSSGS SGSTPVATDV QVSIIESDAL 360 LELRCPDRHG LLVTIMQTLQ EQLRLEVTSV QASSDHGVLL AELRAKVREV HGRRSSISQV 420 KRAIHLIISS G

Sequence ? help Back to Top

Protein Sequence Length: 431 aa Download sequence

MGLVQYAMAI FMDQQETHMI SSICHSNQTS HIDQQSFQTQ RKTSTGQPKP EPNKFNPEYE  60
DDEMEYDDDE IDAECASGSA SHDDHATHNA GSSELMQVET SERVRDGCSS NFGDEIQMLM  120
VCQNSTDDHS NLHGQNEAWH FLYEELCSGY PQSSAAGENQ AMAENAHYAQ TLSLILHRNN  180
ALRQAGGLNT GSYLAVSLQS SFSRWDAGIH GRTVAQGTTR QKMLKSVLLF FSAACNKPPG  240
DPRCDDAGAR REVDFGASHV MQERKRREKL NERFIVLRSL VPFVTKMDKA SILGDTIEYV  300
KQLTKRIQDL ESSTVRGPAM SKEKRALPTG MEGASSSSGS SGSTPVATDV QVSIIESDAL  360
LELRCPDRHG LLVTIMQTLQ EQLRLEVTSV QASSDHGVLL AELRAKVREV HGRRSSISQV  420
KRAIHLIISS G

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	263	268	ERKRRE
2	264	269	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09820.1	4e-44	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG015830.2