PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG015830.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 440aa MW: 48670.3 Da PI: 5.6688

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG015830.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44.2	3.3e-14	267	312	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h + Er+RR+++N++f Lr+l+P +K++Ka+iL ++eY+k+L TRIDC1AG015830.1 267 SHVMQERKRREKLNERFIVLRSLVPFV-----TKMDKASILGDTIEYVKQL 312 899*********************8.....8***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence
MHILQVEEDM GLVQYAMAIF MDQQETHMIS SICHSNQTSH IDQQSFQTQR KTSTGQPKPE 60 PNKFNPEYED DEMEYDDDEI DAECASGSAS HDDHATHNAG SSELMQVETS ERVRDGCSSN 120 FGDEIQMLMV CQNSTDDHSN LHGQNEAWHF LYEELCSGYP QSSAAGENQA MAENAHYAQT 180 LSLILHRNNA LRQAGGLNTG SYLAVSLQSS FSRWDAGIHG RTVAQGTTRQ KMLKSVLLFF 240 SAACNKPPGD PRCDDAGARR EVDFGASHVM QERKRREKLN ERFIVLRSLV PFVTKMDKAS 300 ILGDTIEYVK QLTKRIQDLE SSTVRGPAMS KEKRALPTGM EGASSSSGSS GSTPVATDVQ 360 VSIIESDALL ELRCPDRHGL LVTIMQTLQE QLRLEVTSVQ ASSDHGVLLA ELRAKVREVH 420 GRRSSISQVK RAIHLIISSG

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence

MHILQVEEDM GLVQYAMAIF MDQQETHMIS SICHSNQTSH IDQQSFQTQR KTSTGQPKPE  60
PNKFNPEYED DEMEYDDDEI DAECASGSAS HDDHATHNAG SSELMQVETS ERVRDGCSSN  120
FGDEIQMLMV CQNSTDDHSN LHGQNEAWHF LYEELCSGYP QSSAAGENQA MAENAHYAQT  180
LSLILHRNNA LRQAGGLNTG SYLAVSLQSS FSRWDAGIHG RTVAQGTTRQ KMLKSVLLFF  240
SAACNKPPGD PRCDDAGARR EVDFGASHVM QERKRREKLN ERFIVLRSLV PFVTKMDKAS  300
ILGDTIEYVK QLTKRIQDLE SSTVRGPAMS KEKRALPTGM EGASSSSGSS GSTPVATDVQ  360
VSIIESDALL ELRCPDRHGL LVTIMQTLQE QLRLEVTSVQ ASSDHGVLLA ELRAKVREVH  420
GRRSSISQVK RAIHLIISSG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	272	277	ERKRRE
2	273	278	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09820.1	7e-44	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG015830.1