PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG007920.12
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 274aa    MW: 30763.7 Da    PI: 9.9763
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG007920.12genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.62.6e-1758107155
                AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                        s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  TRIDC1AG007920.12  58 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 107
                        78*******************......55************************997 PP
2AP241.53.3e-13150200155
                AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                        s+y+GV+ +k  grW+A+   +     +k+++lg f+ + eAa+a+++a+ k +g
  TRIDC1AG007920.12 150 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDNEVEAARAYDKAAIKCNG 200
                        89********.7******5553..2.26**********99**********99776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MPVPQHWAEL GFFRPAAPPP DMRILQLQQQ AHAPPPPPPA AQPPVAKKSR RGPRSRSSQY  60
RGVTFYRRTG RWESHIWDCG KQVYLGGFDT AHAAARAYDR AAIKFRGVDA DINFNLSDYE  120
DDMKQMKGLS KEEFVHVLRR QSTGFSRGSS KYRGVTLHKC GRWEARMGQF LGKKYIYLGL  180
FDNEVEAARA YDKAAIKCNG REAVTNFEPS TYDAELLNEV AAEGADVDLN LSISQPTSQS  240
PKRDKSSLGL QLHHGSYDGS ELKRPKASTN AFFK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.35e-99AP2 family protein