PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1AG004620.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | C2H2 | ||||||||
Protein Properties | Length: 198aa MW: 21494.8 Da PI: 8.0216 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.6 | 0.00042 | 59 | 81 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+++F++ L H +H TRIDC1AG004620.3 59 FVCKTCDRVFPSFQALGGHRASH 81 89**********99999998887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 198 aa Download sequence |
CFMVQMAYKY SCGLIAMTKR YAFEEKEMAR MLLLVSREQA MPMPMPMAVR GDRAPERVFV 60 CKTCDRVFPS FQALGGHRAS HKKPRLDDGG NLKPKLHGCS VCGLEFAIGQ ALGGHMRRHR 120 AMAVGGGGGV MAITPPTAAI KKHGDSSDDA VVGMKRGLWL DLNHPPCDEY GTSSESDDEC 180 GHDAAAGGYT FHQFLDTG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37430.1 | 2e-25 | C2H2 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1AG004620.3 |