PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG004620.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 186aa    MW: 20490.1 Da    PI: 9.6224
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG004620.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.70.000395476123
                      EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                      ++C+ C+++F++   L  H  +H
  TRIDC1AG004620.2 54 FVCKTCDRVFPSFQALGGHRASH 76
                      89**********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MAYKYSCGLI AMTKRYAFEE KEMARMLLLV SREQAMPMPM PMAVRGDRAP ERVFVCKTCD  60
RVFPSFQALG GHRASHKKPR LDDGGNLKPK LHGCSVCGLE FAIGQALGGH MRRHRAMAVG  120
GGGGVMAITP PTAAIKKHGD SSDDAVVGMK RGLWLDLNHP PSVDECPVKG MPWHINHFFE  180
MINFVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37430.17e-26C2H2 family protein