PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG003270.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 415aa MW: 47144.3 Da PI: 6.9788

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG003270.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	49.2	1.8e-15	145	224	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 ++Yn Y+ e+GFs+r ks+++ +g ++++ C++ gk+++ +++ ++rt+C a++++ + +d+ w++ + + HnHe+ TRIDC1AG003270.6 145 DYYNLYSWECGFSIRYGKSRTN-VKGAKSMQELLCNCGGKPKKVNST---------SSRTECPAMIRLLRIEDDGWYICEYKVSHNHEML 224 69**************9998.7777999******9987665.........9****************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 415 aa Download sequence
MSSPADPLDH EPTVIESIST QEKRADQCAA GIAQMSVKEA RPLLTVAEAD QLDSSNGSTE 60 QHVSTVVDGD PGSKSRTPNV IDVEREKSGW VRRHRHSAMP DERAASAERI SALELAFRGF 120 AERKGDEVVV PSMGLTFDSL GEAYDYYNLY SWECGFSIRY GKSRTNVKGA KSMQELLCNC 180 GGKPKKVNST SSRTECPAMI RLLRIEDDGW YICEYKVSHN HEMLHTCAQK LHFPSHRHID 240 KYTRELVSQL RQNNVNLSKV YSIIGTFFGR IENVPFTKRC LRTLCAKLGR DQADEDVKKT 300 MDYFAELKQS DPEFTYTVRV DSESRVRTLI WTTGKSKLQY HYFGDAVTFD TTYGTNLYDM 360 PFELFVGVKN HFQSVIYAGL LMHDEKVESF NWVFSEFVKL MGGKKPITIL TEPWS

Sequence ? help Back to Top

Protein Sequence Length: 415 aa Download sequence

MSSPADPLDH EPTVIESIST QEKRADQCAA GIAQMSVKEA RPLLTVAEAD QLDSSNGSTE  60
QHVSTVVDGD PGSKSRTPNV IDVEREKSGW VRRHRHSAMP DERAASAERI SALELAFRGF  120
AERKGDEVVV PSMGLTFDSL GEAYDYYNLY SWECGFSIRY GKSRTNVKGA KSMQELLCNC  180
GGKPKKVNST SSRTECPAMI RLLRIEDDGW YICEYKVSHN HEMLHTCAQK LHFPSHRHID  240
KYTRELVSQL RQNNVNLSKV YSIIGTFFGR IENVPFTKRC LRTLCAKLGR DQADEDVKKT  300
MDYFAELKQS DPEFTYTVRV DSESRVRTLI WTTGKSKLQY HYFGDAVTFD TTYGTNLYDM  360
PFELFVGVKN HFQSVIYAGL LMHDEKVESF NWVFSEFVKL MGGKKPITIL TEPWS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	2e-34	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG003270.6