PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1AG003270.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | FAR1 | ||||||||
Protein Properties | Length: 413aa MW: 46830 Da PI: 7.3391 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 49.2 | 1.7e-15 | 145 | 224 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 ++Yn Y+ e+GFs+r ks+++ +g ++++ C++ gk+++ +++ ++rt+C a++++ + +d+ w++ + + HnHe+ TRIDC1AG003270.5 145 DYYNLYSWECGFSIRYGKSRTN-VKGAKSMQELLCNCGGKPKKVNST---------SSRTECPAMIRLLRIEDDGWYICEYKVSHNHEML 224 69****************9998.7777999**********9987665.........9******************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 413 aa Download sequence |
MSSPADPLDH EPTVIESIST QEKRADQCAA GIAQMSVKEA RPLLTVAEAD QLDSSNGSTE 60 QHVSTVVDGD PGSKSRTPNV IDVEREKSGW VRRHRHSAMP DERAASAERI SALELAFRGF 120 AERKGDEVVV PSMGLTFDSL GEAYDYYNLY SWECGFSIRY GKSRTNVKGA KSMQELLCNC 180 GGKPKKVNST SSRTECPAMI RLLRIEDDGW YICEYKVSHN HEMLHTCAQK LHFPSHRHID 240 KYTRELVSQL RQNNVNLSKV YSIIGTFFGR IENVPFTKRC LRTLCAKLGR DQADEDVKKT 300 MDYFAELKQS DPEFTYTVRV DSESRVRTLI WTTGKSKLQY HYFGDAVTFD TTYGTNLYDM 360 PFELFVGVKN HFQSVIYAGL LMHDEKVESF NWVFSEFVKL MGGKKPITIL TGK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G10240.1 | 2e-34 | FAR1 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1AG003270.5 |