PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG003170.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 432aa    MW: 49735.2 Da    PI: 9.2603
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG003170.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS349.55.4e-107524242374
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                       ++lL++c +av+++++ la++lL+++++++s dgd  qRla+y++ +L+arla+++ ++y+ l  ++ts   +++ l a++lf+  +P+ + s
  TRIDC1AG003170.5  52 KTLLINCSQAVAEDNHLLASKLLKKIRQHSSADGDCSQRLAFYLADGLEARLAGTGGQVYRNLMERQTS---TTDWLDAHSLFVASCPFDRTS 141
                       789************************************************************999999...8999999************** PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
                       +  a qaIl+  +g+ rvHi+Df+i+ G+QWp ++q++a+++eg+p+lRiTg++ p++g  s e++eetg+rLa++A+ ++vpf+++ ++a+r
  TRIDC1AG003170.5 142 YYFASQAILDVSQGKPRVHIVDFGIGFGFQWPLMIQKFAQQEEGAPKLRITGIDVPQPGfrSCEMIEETGKRLADYANLFKVPFQYQGIAASR 234
                       **********************************************************9*9******************************** PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl.eaklpr 277
                       +e++++e+L+++++E+l++n+++++++l +e+ +++s rd+vLk+++ ++Pk+++    +  ++s+ F +rf e + +ys++fd+l ++ +pr
  TRIDC1AG003170.5 235 WETIKIEDLNIDEDEVLIINCMFRMKNLGHETEAINSVRDKVLKIMRMMNPKIFISGTVNGLRSSPFFIKRFKEVIFHYSSMFDMLdANVVPR 327
                       **************************************************************************************5556899 PP

              GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370
                       ++++r+++Er+++g+++ n++acegaer+er e++++W++r  +aGF+++p++  +   + ++ +++  +++   e++g+l++gWk+r ++++
  TRIDC1AG003170.5 328 DNKARKMIERMIFGKDALNIIACEGAERTERPESYRQWHARCVKAGFQQLPVDPAVLRIIVYMKNTFWHEEFFAVEDRGWLLQGWKGRGIYAI 420
                       99*****************************************************************9999********************** PP

              GRAS 371 SaWr 374
                       S W+
  TRIDC1AG003170.5 421 SKWK 424
                       ***8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 432 aa     Download sequence    
LLCYGLESFK KTTRLRRGLA EEGNKNSLKG RSEGRQKLWQ RKQPRTELVD LKTLLINCSQ  60
AVAEDNHLLA SKLLKKIRQH SSADGDCSQR LAFYLADGLE ARLAGTGGQV YRNLMERQTS  120
TTDWLDAHSL FVASCPFDRT SYYFASQAIL DVSQGKPRVH IVDFGIGFGF QWPLMIQKFA  180
QQEEGAPKLR ITGIDVPQPG FRSCEMIEET GKRLADYANL FKVPFQYQGI AASRWETIKI  240
EDLNIDEDEV LIINCMFRMK NLGHETEAIN SVRDKVLKIM RMMNPKIFIS GTVNGLRSSP  300
FFIKRFKEVI FHYSSMFDML DANVVPRDNK ARKMIERMIF GKDALNIIAC EGAERTERPE  360
SYRQWHARCV KAGFQQLPVD PAVLRIIVYM KNTFWHEEFF AVEDRGWLLQ GWKGRGIYAI  420
SKWKPDETYD GQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-147GRAS family protein