PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY93717.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

bHLH

Protein Properties

Length: 645aa MW: 71091.5 Da PI: 6.4173

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY93717.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.4	9.4e-12	446	493	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++h Er+RR++i ++f+ L +l+P+ +K++K++ L +++eY+++L+ TEY93717.1 446 KNHVLSERKRREKISERFAILGSLVPSG-----GKVDKVSLLDHTIEYLRELE 493 579999******************98.....8**************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 645 aa Download sequence
MILFGNLVIH HIIQAEKGRS STMATANQNG VPDDLREQLA LAVRSIQWSY AIFWSFSAKQ 60 SGALGWSEGY YNGDIKTRKT VQAVELNSDP LGLQRSDQLR ELFESLSLGE STPQPKRPTA 120 ALSPEDLTDT EWYFLVCMSF VFNVGQGLPG RSYAENEMIW LRNAHLADTK LFARSLLAKA 180 SVNSASLQTV VCFPHLGGVV ELGTTELVPE DRGLIQHIKS SFLESSSDTV INLSHDLVYQ 240 VPDHSNIPEN NLDEVEVYSP DTSSDEFADN VLIEGSCVAD GADGEASQLQ SWQCKDDAVS 300 NGTNNATSSS DCVSQTHGKP ELKAQEFDGK KSSAANCVPV SQECNQQTLP SFNGGGDVHY 360 HSVLSSLLKS SHQLILGPYR NGKRGSSFIS WNNRKSSPRL LQSASPQRLL KKVLFEVARL 420 HENESAKSKD RCDDRSVQQE GEEVDKNHVL SERKRREKIS ERFAILGSLV PSGGKVDKVS 480 LLDHTIEYLR ELERKVQDLE AYKEATERES TTQSRAHDAM ERTSDNYGHS KLGSITKLLG 540 NKKRASDVEK TAPENKRARS SSSTDSITIS ITDKDVLIEM RCSWRQCVLI QVMEALTQLN 600 LESQSVQSSN TDGILSLSIN AKSKGVKGAS AGAIKQALQK IIRKN

Sequence ? help Back to Top

Protein Sequence Length: 645 aa Download sequence

MILFGNLVIH HIIQAEKGRS STMATANQNG VPDDLREQLA LAVRSIQWSY AIFWSFSAKQ  60
SGALGWSEGY YNGDIKTRKT VQAVELNSDP LGLQRSDQLR ELFESLSLGE STPQPKRPTA  120
ALSPEDLTDT EWYFLVCMSF VFNVGQGLPG RSYAENEMIW LRNAHLADTK LFARSLLAKA  180
SVNSASLQTV VCFPHLGGVV ELGTTELVPE DRGLIQHIKS SFLESSSDTV INLSHDLVYQ  240
VPDHSNIPEN NLDEVEVYSP DTSSDEFADN VLIEGSCVAD GADGEASQLQ SWQCKDDAVS  300
NGTNNATSSS DCVSQTHGKP ELKAQEFDGK KSSAANCVPV SQECNQQTLP SFNGGGDVHY  360
HSVLSSLLKS SHQLILGPYR NGKRGSSFIS WNNRKSSPRL LQSASPQRLL KKVLFEVARL  420
HENESAKSKD RCDDRSVQQE GEEVDKNHVL SERKRREKIS ERFAILGSLV PSGGKVDKVS  480
LLDHTIEYLR ELERKVQDLE AYKEATERES TTQSRAHDAM ERTSDNYGHS KLGSITKLLG  540
NKKRASDVEK TAPENKRARS SSSTDSITIS ITDKDVLIEM RCSWRQCVLI QVMEALTQLN  600
LESQSVQSSN TDGILSLSIN AKSKGVKGAS AGAIKQALQK IIRKN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	452	457	ERKRRE
2	453	458	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41315.1	1e-146	bHLH family protein