PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY93659.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

Trihelix

Protein Properties

Length: 296aa MW: 34364.1 Da PI: 6.9005

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY93659.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	46.3	1.1e-14	2	49	38	87
trihelix 38 mrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 ++e+g++rs+k+C+ek+enl k+ykk+keg+ +r ++ +++++f+qlea TEY93659.1 2 CEEHGYQRSSKKCREKFENLYKYYKKTKEGKAGR--QDGKHYRFFRQLEA 49 89****************************98..55667*****85 PP
2	Myb_DNA-binding	24.2	7.9e-08	192	242	3	45
SS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHT...TTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg.....tWktIartmg...kgRtlkqcksrwq 45 WT+ E +l+++ +++ g+ W+ Ia++mg R++ ck++w TEY93659.1 192 HWTECEISKLIQLATEMEGRfdeemVWEEIAAKMGcfgHERSAAACKEKWE 242 6***********************************99********5 PP
3	trihelix	43.8	6.8e-14	193	258	2	71
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr 71 Wt+ e+ +Li++ +eme r+ ++ Wee+++km g ers+ Ckekwe+++++ k ++ ++++ TEY93659.1 193 WTECEISKLIQLATEMEGRFDEE----MVWEEIAAKMGCFGHERSAAACKEKWESIHNYVNKKRRDSNSN 258 ******************987....89***************************987777666654 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
MCEEHGYQRS SKKCREKFEN LYKYYKKTKE GKAGRQDGKH YRFFRQLEAL YGTTEANISS 60 VSISEAAHHT SGPTPKASDT SLSLSNYSDA DTSSSDDSDD TKKSGWKVKI RDFIDAQMKR 120 LMEKQEAWME KMVRMIEEKE RERAAREEEW RKHDAARIER EHRFWAGERA WIEARDAALM 180 NALHKLTGKE SHWTECEISK LIQLATEMEG RFDEEMVWEE IAAKMGCFGH ERSAAACKEK 240 WESIHNYVNK KRRDSNSNYQ SNVYCEQGLN NDHGSSSSAA TGISESCFRY FMGDAY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03680.1	6e-65	Trihelix family protein