PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY93099.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MYB

Protein Properties

Length: 1047aa MW: 118307 Da PI: 6.8162

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY93099.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.9	2e-07	429	473	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g+WT+ Ed+ +++ +++ G +W + t+g++Rt+ qc sr+q TEY93099.1 429 GPWTAMEDKNILHIIQEKGFINWIDFSVTLGTNRTPFQCLSRYQR 473 89*****************************************96 PP
2	Myb_DNA-binding	46	1.2e-14	482	527	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WTteEd +l av+ +G +W +a+ + gRt+ qc +rw+k l TEY93099.1 482 REWTTEEDNQLRAAVETYGESNWQVVANALK-GRTGTQCSNRWLKTL 527 68**************************9.*********9975 PP
3	Myb_DNA-binding	53.7	4.6e-17	535	579	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 g WT eEd++l+ av+++G +tW+++a++++ gRt qc++rw + TEY93099.1 535 GTWTLEEDKRLKVAVTLFGAKTWRKVAKCVP-GRTHVQCRERWVNC 579 79***************************.*********986 PP
4	Myb_DNA-binding	40.9	4.7e-13	587	629	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g WT eEd+ll++a++ +G W+++a++++ +Rt++ c rw TEY93099.1 587 GEWTREEDLLLLEAIANHGYC-WSKVAACIP-HRTDNLCLRRWKV 629 79***************99.*****.*********86 PP

Sequence ? help Back to Top
Protein Sequence Length: 1047 aa Download sequence
MPSSKEEISD SDSDDGFSED MEALRRACQL IGETPTSTTA AAAASGIASL GSSSEGDSDS 60 EGDDDLQLVQ SIQKRFAFPT DLGEEPLKTK PSCTVLPDWS DSEDIEDDYE TLRAIQRRFS 120 AYNDGSLKDY FEEFSHTHEQ VGATIIDSEK ETSNSFVERT NAREGFLNCV DTSEPTGKNV 180 EACDNAGGSS DIAEWNETGV NDEAELPLKT SQFPNSALAF VDAIKKNRLC QKLIRSKMMQ 240 VEARMEELDK LIEGVRILKN FQVDSKKRIG RSFSQKKDPR VRLISVPKLK ANMKTSENNV 300 PASCKGPPEN VHVPNYKETM AAFSIPCNKE KWSKEERENL LKGVKQQFQE MLLQQCVDRL 360 NEADGYYESS NVDSIMESIK ETDLTPERIR QFLPKVNWEQ LTAMYVPRRT GAECQVMYLN 420 HEDPLINHGP WTAMEDKNIL HIIQEKGFIN WIDFSVTLGT NRTPFQCLSR YQRSLNASIL 480 KREWTTEEDN QLRAAVETYG ESNWQVVANA LKGRTGTQCS NRWLKTLHPA RKRSGTWTLE 540 EDKRLKVAVT LFGAKTWRKV AKCVPGRTHV QCRERWVNCL DPSIIHGEWT REEDLLLLEA 600 IANHGYCWSK VAACIPHRTD NLCLRRWKVL CPAEVPLLQT ARKIQKFALI SNFVDRESER 660 PALGPKDFLL PEPLRITGNE NVDPSTKKKK ISRRRRGARK HNEEDDLSSE NSEEVLMLTD 720 GNELEMQGSS VHREGTRRST RLRKRSARLL DVSEGEEITE PRVSDGNNTR KSRTQKKRSG 780 KDAATTSAAV ISDEACFEEY NHLDPVEEPT PEVELGGKDA IITQPVKVSK LHPRKRKSQV 840 LKEAQHLDPV EEPALEVELG GKDAIITQPA KASKLHPRKR KSQVLKEVQQ TKSKVPRQAV 900 TKRRMIMDKK LTNATDDHPS SFPDPDILID DTRATEAGST EGKNIEDMQL ALVEIKGDGM 960 NLPSSLQQPG DDATSPSPVN VDDPLRKRKK RAQIHIFYQC KRRKTGGGDR LKEEGLRRDD 1020 QTCKNQAEAG DDMTIAQILQ QIKEKRK

Sequence ? help Back to Top

Protein Sequence Length: 1047 aa Download sequence

MPSSKEEISD SDSDDGFSED MEALRRACQL IGETPTSTTA AAAASGIASL GSSSEGDSDS  60
EGDDDLQLVQ SIQKRFAFPT DLGEEPLKTK PSCTVLPDWS DSEDIEDDYE TLRAIQRRFS  120
AYNDGSLKDY FEEFSHTHEQ VGATIIDSEK ETSNSFVERT NAREGFLNCV DTSEPTGKNV  180
EACDNAGGSS DIAEWNETGV NDEAELPLKT SQFPNSALAF VDAIKKNRLC QKLIRSKMMQ  240
VEARMEELDK LIEGVRILKN FQVDSKKRIG RSFSQKKDPR VRLISVPKLK ANMKTSENNV  300
PASCKGPPEN VHVPNYKETM AAFSIPCNKE KWSKEERENL LKGVKQQFQE MLLQQCVDRL  360
NEADGYYESS NVDSIMESIK ETDLTPERIR QFLPKVNWEQ LTAMYVPRRT GAECQVMYLN  420
HEDPLINHGP WTAMEDKNIL HIIQEKGFIN WIDFSVTLGT NRTPFQCLSR YQRSLNASIL  480
KREWTTEEDN QLRAAVETYG ESNWQVVANA LKGRTGTQCS NRWLKTLHPA RKRSGTWTLE  540
EDKRLKVAVT LFGAKTWRKV AKCVPGRTHV QCRERWVNCL DPSIIHGEWT REEDLLLLEA  600
IANHGYCWSK VAACIPHRTD NLCLRRWKVL CPAEVPLLQT ARKIQKFALI SNFVDRESER  660
PALGPKDFLL PEPLRITGNE NVDPSTKKKK ISRRRRGARK HNEEDDLSSE NSEEVLMLTD  720
GNELEMQGSS VHREGTRRST RLRKRSARLL DVSEGEEITE PRVSDGNNTR KSRTQKKRSG  780
KDAATTSAAV ISDEACFEEY NHLDPVEEPT PEVELGGKDA IITQPVKVSK LHPRKRKSQV  840
LKEAQHLDPV EEPALEVELG GKDAIITQPA KASKLHPRKR KSQVLKEVQQ TKSKVPRQAV  900
TKRRMIMDKK LTNATDDHPS SFPDPDILID DTRATEAGST EGKNIEDMQL ALVEIKGDGM  960
NLPSSLQQPG DDATSPSPVN VDDPLRKRKK RAQIHIFYQC KRRKTGGGDR LKEEGLRRDD  1020
QTCKNQAEAG DDMTIAQILQ QIKEKRK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	985	991	LRKRKKR
2	986	990	RKRKK
3	986	1004	RKRKKRAQIHIFYQCKRRK
4	987	1005	RKRKKRAQIHIFYQCKRRK
5	988	1006	RKRKKRAQIHIFYQCKRRK
6	989	1007	RKRKKRAQIHIFYQCKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18100.1	0.0	MYB family protein