PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY92657.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MYB

Protein Properties

Length: 539aa MW: 58637.1 Da PI: 5.2035

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY92657.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.6	1.2e-17	46	93	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed +lv++vk++G g+W+++ ++ g+ R++k+c++rw ++l TEY92657.1 46 KGPWTAAEDAILVEYVKKHGEGNWNAVQKHTGLARCGKSCRLRWANHL 93 79******************************************9986 PP
2	Myb_DNA-binding	40.6	5.9e-13	99	152	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.........TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.........kgRtlkqcksrwqk 46 +g++T eE+ +++++++++G++ W++ a+++ gRt++++k++w++ TEY92657.1 99 KGAFTSEEERIIIELHAKMGNK-WARMAAHVSfklhfnyflPGRTDNEIKNYWNT 152 799*****************.****************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 539 aa Download sequence
MLDVLEQMGN SSTAESEDGV LSADSPLSND GDNFGGSSSG GIVLKKGPWT AAEDAILVEY 60 VKKHGEGNWN AVQKHTGLAR CGKSCRLRWA NHLRPNLKKG AFTSEEERII IELHAKMGNK 120 WARMAAHVSF KLHFNYFLPG RTDNEIKNYW NTRIKRRQRA GLSLYPPDLC LQSLPENQQQ 180 LSSPRIYDGD KACDILQSNG YWAPNIMFDS LNNFRYAPAI PGIPGSVSMG NGFASPHSYG 240 FNPQTIGVSG QAREPDEPMS DYGSGGVNEA PMFSRTQTDS CVNKSFQSFG LCYPYDTDHT 300 KKLFSSDVNP DTPFMSDVTY SASEHFANAQ KSELPSLQYQ ETGLGVWDPA PESFDSLVQS 360 PLPGPLPSHC PSPGSSGLLE DLIYEAMALG RSENQSSALA TPSNVSHGEV TDGSALRTCS 420 TEFKGCIDRN SPSGNSMGSL FNRYTPTTGK SLEDDVTMHH VKSEVFDPSW ILDGESKVDY 480 LRPDAMLGSC WVEQSGPASK QRGSMAALLG DTSASASTRG FTSCSWNNLP PVCQISDIP

Sequence ? help Back to Top

Protein Sequence Length: 539 aa Download sequence

MLDVLEQMGN SSTAESEDGV LSADSPLSND GDNFGGSSSG GIVLKKGPWT AAEDAILVEY  60
VKKHGEGNWN AVQKHTGLAR CGKSCRLRWA NHLRPNLKKG AFTSEEERII IELHAKMGNK  120
WARMAAHVSF KLHFNYFLPG RTDNEIKNYW NTRIKRRQRA GLSLYPPDLC LQSLPENQQQ  180
LSSPRIYDGD KACDILQSNG YWAPNIMFDS LNNFRYAPAI PGIPGSVSMG NGFASPHSYG  240
FNPQTIGVSG QAREPDEPMS DYGSGGVNEA PMFSRTQTDS CVNKSFQSFG LCYPYDTDHT  300
KKLFSSDVNP DTPFMSDVTY SASEHFANAQ KSELPSLQYQ ETGLGVWDPA PESFDSLVQS  360
PLPGPLPSHC PSPGSSGLLE DLIYEAMALG RSENQSSALA TPSNVSHGEV TDGSALRTCS  420
TEFKGCIDRN SPSGNSMGSL FNRYTPTTGK SLEDDVTMHH VKSEVFDPSW ILDGESKVDY  480
LRPDAMLGSC WVEQSGPASK QRGSMAALLG DTSASASTRG FTSCSWNNLP PVCQISDIP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06100.3	2e-96	MYB family protein