PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY92584.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | LBD | ||||||||
Protein Properties | Length: 262aa MW: 28279.1 Da PI: 7.1999 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 100.7 | 1.4e-31 | 4 | 107 | 1 | 99 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 +C++C+vlr++C+++C ++p++ p++q++++ +++k++G++ +++l++a+p++ r+++++sl+yeA+ r+ +P+yG+vg+++++++ql+q+++e+ TEY92584.1 4 SCNGCRVLRKGCSDSCSIRPCLewiksPESQANATVFLAKFYGRAGLMNLINAAPDNLRPATFRSLLYEACGRIVNPIYGSVGLMWSGSWQLCQAAVEA 102 6*************************************************************************************************9 PP DUF260 95 allke 99 +l ++ TEY92584.1 103 VLKGA 107 98766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 262 aa Download sequence |
MRLSCNGCRV LRKGCSDSCS IRPCLEWIKS PESQANATVF LAKFYGRAGL MNLINAAPDN 60 LRPATFRSLL YEACGRIVNP IYGSVGLMWS GSWQLCQAAV EAVLKGAPIA PMPTDAAEAK 120 NGPPLKAFDI RHVTKEDTLS GSDDLHRVRN RCRFKRARRS RVGSPDESGN GSALSHQSEL 180 AAERTSRRSE ESLASAETPE PVADRSSESE GEDGMGLDLT LGFEPIKSCV KPKSWKLGEA 240 VDGSAEEAGL CKMELGLDFS AL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G02550.1 | 4e-90 | LBD family protein |