PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY92420.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

M-type_MADS

Protein Properties

Length: 451aa MW: 51685.3 Da PI: 4.5688

Description

M-type_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY92420.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	61.5	9.8e-20	49	87	7	45
HHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS SRF-TF 7 snrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45 rqvt+ kRr+gilKKA+E+SvLCd+ + +i+fs++gk TEY92420.1 49 NSRQVTYGKRRAGILKKAQEISVLCDIPIVLIMFSPSGK 87 579**********************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 451 aa Download sequence
MFSPFFYFPQ PLQLTSFGYS IFRICTCVED CASRMGRVKL KIQRLETLNS RQVTYGKRRA 60 GILKKAQEIS VLCDIPIVLI MFSPSGKPSI FCGQRSNIDE MIAKYAQLTP KERAKRRLES 120 LERNFKKLDQ DVDIEEFLDT STPSIEEMQN RVMSLQLQLD EARERVRWWS NPDTIEDVEH 180 LDQMEDSLRE SLNRTQVTKE KFFKEPLIQF DCTSQVCGDF GRVYEQELPK PQFPNAMPFP 240 LATTSDQDCT NQPWLPGGEA QHMMLPGEPQ FLGSRDMECS RDASFPTCSG YFADVKEQEL 300 ENSRQMKTER LEEGLTVDDY TYSANLRLPL GDQYPYNSFG NICFPNLMET GKDANFQLSS 360 LDYQINGNFD LPRSVCNYFP PSLVPAAGSC AISMLNDHSY PQVSTSRFCD MCNKFSNWSF 420 SDDVVLDDER QQGLSSSKNL DISKISNSQI D

Sequence ? help Back to Top

Protein Sequence Length: 451 aa Download sequence

MFSPFFYFPQ PLQLTSFGYS IFRICTCVED CASRMGRVKL KIQRLETLNS RQVTYGKRRA  60
GILKKAQEIS VLCDIPIVLI MFSPSGKPSI FCGQRSNIDE MIAKYAQLTP KERAKRRLES  120
LERNFKKLDQ DVDIEEFLDT STPSIEEMQN RVMSLQLQLD EARERVRWWS NPDTIEDVEH  180
LDQMEDSLRE SLNRTQVTKE KFFKEPLIQF DCTSQVCGDF GRVYEQELPK PQFPNAMPFP  240
LATTSDQDCT NQPWLPGGEA QHMMLPGEPQ FLGSRDMECS RDASFPTCSG YFADVKEQEL  300
ENSRQMKTER LEEGLTVDDY TYSANLRLPL GDQYPYNSFG NICFPNLMET GKDANFQLSS  360
LDYQINGNFD LPRSVCNYFP PSLVPAAGSC AISMLNDHSY PQVSTSRFCD MCNKFSNWSF  420
SDDVVLDDER QQGLSSSKNL DISKISNSQI D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18750.1	7e-71	M-type_MADS family protein